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LBMC
ReGArDS
ChIA-PET_network
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39e627ae1420f177d2d49fce546544d27a378166
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chia-pet_network
src
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Jan 20, 2021
src/find_interaction_cluster/clip_figures/__main__.py: add sl_reg parameter
· 39e627ae
nfontrod
authored
4 years ago
39e627ae
src/find_interaction_cluster/clip_figures/clip_analyser.py: add sl_reg parameter
· c06baf31
nfontrod
authored
4 years ago
c06baf31
Jan 19, 2021
src/find_interaction_cluster/clip_figures/clip_compo_analyser.py: fix...
· 0effc7d1
nfontrod
authored
4 years ago
0effc7d1
src/find_interaction_cluster/clip_figures/clip_compo_*.py: add a parameter display_size
· b7c8f6cd
nfontrod
authored
4 years ago
b7c8f6cd
src/find_interaction_cluster/clip_figures/__main__.py: add 3 new parameters:...
· 8e2676a1
nfontrod
authored
4 years ago
8e2676a1
src/find_interaction_cluster/clip_figures/clip_analyser.py: add 3 new...
· a99a462f
nfontrod
authored
4 years ago
a99a462f
src/find_interaction_cluster/nt_and_community.py: fix create_outfiles function
· 4a9ae1f4
nfontrod
authored
4 years ago
4a9ae1f4
src/find_interaction_cluster/__main__.py: add display_size parameter
· 1bb5612d
nfontrod
authored
4 years ago
1bb5612d
src/find_interaction_cluster/nt_and_community.py: add 2 new parameters to...
· d8c9d672
nfontrod
authored
4 years ago
d8c9d672
src/find_interaction_cluster/community_finder.py: call get_community -> get_communities_basefile
· 3edbe8a3
nfontrod
authored
4 years ago
3edbe8a3
src/find_interaction_cluster/sf_and_communities.py: call get_community -> get_communities_basefile
· b76ca88f
nfontrod
authored
4 years ago
b76ca88f
src/find_interaction_cluster/config.py: get_community ->...
· 92b7dca7
nfontrod
authored
4 years ago
92b7dca7
Jan 18, 2021
src/find_interaction_cluster/community_figures/fig_functions.py: change in...
· a1f2fb6b
nfontrod
authored
4 years ago
a1f2fb6b
src/find_interaction_cluster/community_figures/*.py: can now perform logit tests
· 3c50729f
nfontrod
authored
4 years ago
3c50729f
src/find_interaction_cluster/community_figures/*.py: add a paramter...
· a90c69e7
nfontrod
authored
4 years ago
a90c69e7
Jan 15, 2021
src/find_interaction_cluster/clip_figures/clip_compo_analyser.py: fix...
· a072ad25
nfontrod
authored
4 years ago
a072ad25
src/find_interaction_cluster/clip_figures/clip_compo_launcher.py: add launcher...
· ef79642f
nfontrod
authored
4 years ago
ef79642f
Jan 13, 2021
src/find_interaction_cluster/clip_figures/clip_compo_analyser.py: launch...
· 5a4fb522
nfontrod
authored
4 years ago
5a4fb522
src/find_interaction_cluster/clip_figures/clip_compo_*: creation of a script...
· 496626e8
nfontrod
authored
4 years ago
496626e8
src/find_interaction_cluster/clip_figures/__main__.py: add a parameter permutation
· b01ba86e
nfontrod
authored
4 years ago
b01ba86e
src/find_interaction_cluster/clip_figures/clip_analyser.py: add a parameter iteration
· fece3a1d
nfontrod
authored
4 years ago
fece3a1d
src/find_interaction_cluster/clip_figures/config.py: add parameter test_clip_file
· e5ad126c
nfontrod
authored
4 years ago
e5ad126c
src/find_interaction_cluster/community_figures/fig_functions.py: add reg-adj...
· 02f9d6b8
nfontrod
authored
4 years ago
02f9d6b8
src/find_interaction_cluster/clip_figures/clip_analyser.py: analyse now the clip density
· fbb7ac9b
nfontrod
authored
4 years ago
fbb7ac9b
Jan 12, 2021
src/find_interaction_cluster/clip_figures/*.py: creation of a module to...
· 706d947a
nfontrod
authored
4 years ago
706d947a
src/find_interaction_cluster/community_figures/fig_functions.py: closing...
· c4cad384
nfontrod
authored
4 years ago
c4cad384
src/db_utils/config.py: add a test_files attribute for Config class
· e470b4f3
nfontrod
authored
4 years ago
e470b4f3
src/find_interaction_cluster/__main__.py: docstrig and lazyparser changes for test_type paramter
· af2c94ab
nfontrod
authored
4 years ago
af2c94ab
src/find_interaction_cluster/nt_and_community.py: fix a test in compute_controls_distances
· b13ecc0c
nfontrod
authored
4 years ago
b13ecc0c
src/nt_composition/distance.py: change in compute_controls_distances function
· a9b2a119
nfontrod
authored
4 years ago
a9b2a119
src/find_interaction_cluster/community_figures/fig_functions.py: fix...
· d2e6dcc5
nfontrod
authored
4 years ago
d2e6dcc5
Jan 07, 2021
src/find_interaction_cluster/community_figures/__main__.py: lazyparser...
· cbb0dd0b
nfontrod
authored
4 years ago
cbb0dd0b
src/find_interaction_cluster/community_figures/fig_functions.py: Add a...
· c85e0796
nfontrod
authored
4 years ago
c85e0796
src/nt_composition/{__main__.py, distance.py, make_nt_correlation}: add a...
· d417a37c
nfontrod
authored
4 years ago
d417a37c
Jan 04, 2021
src/find_interaction_cluster/community_figures/fig_functions.py: display dots...
· 09486394
nfontrod
authored
4 years ago
09486394
src/find_interaction_cluster/community_figures/__main__.py: fix constraint of iteration parameter
· 7fda7fc3
nfontrod
authored
4 years ago
7fda7fc3
src/find_interaction_cluster/nt_and_community.py: usage of community_figure new module
· 0e813882
nfontrod
authored
4 years ago
0e813882
src/find_interaction_cluster/community_figures/fig_functions.py: fix lm_with_ctrl function
· a7cf3b21
nfontrod
authored
4 years ago
a7cf3b21
src/find_interaction_cluster/community_figures/fig_functions.py: fix get_permutation_mean function
· 7a8fc9fb
nfontrod
authored
4 years ago
7a8fc9fb
src/find_interaction_cluster/community_figures/fig_functions.py: deletion of...
· 661d27aa
nfontrod
authored
4 years ago
661d27aa
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