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This repository is a template containing scripts to help you build your own nextflow pipeline.

RNA-seq analysis of cell layer-specific expression of gene PhDEF in Petunia petals

Genotypy is a tool to detect genomic barcodes inserted into specific loci from any kind of sequencing data

minimal git repo

Scripts for paper Evaluation of genome and base editing tools in maize protoplasts (Fierlej et al, Front. Plant Sci. 2022)

A single-cell RNA-Seq data analysis performed with scanpy, starting from the integration of multiple datasets for removing the batch effect, up to cell trajectory inference with PAGA

Scripts used for scRNA-Seq and ChIP-Seq analysis in paper "Interplay between petal identity and cell layer identity in petunia flowers", by Cavallini-Speisser, Désert et al.

This repository is a template containing scripts to help you build your own nextflow pipeline.

This repository is a template containing scripts to help you build your own nextflow pipeline.

This repository is a template containing scripts to help you build your own nextflow pipeline.

Gene expression in cells expressing the anti-viral protein ISG20 or not. RNAseq analysis and graphic representations.