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Commit af2c94ab authored by nfontrod's avatar nfontrod
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src/find_interaction_cluster/__main__.py: docstrig and lazyparser changes for test_type paramter

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......@@ -22,7 +22,7 @@ from .colocalisation_n_ppi_analysis import coloc_ppi_stat_main
@lp.parse(weight=range(1, 11), global_weight=range(11),
feature=('gene', 'exon'), region=('', 'exon', 'intron', 'gene'),
iteration="iteration > 20", test_type=('lm', 'perm'),
iteration="iteration > 20", test_type=('lm', 'permutation'),
component_type=("nt", "aa", "dnt"))
def launcher(weight: int = 1,
global_weight: int = 0,
......@@ -55,7 +55,7 @@ def launcher(weight: int = 1,
:param project: The project name of interest \
(only used is global_weight = 0).
:param test_type: The king of test to perform for frequency analysis. \
(default 'lmm') (choose from 'lmm', 'perm')
(default 'lm') (choose from 'lm', 'permutation')
:param ps: The number of processes to use
"""
logging_def(ConfigGraph.community_folder, __file__, logging_level)
......
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