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Pipeline for phylogenetic analysis of legionella genes.
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Analysis of the composition biais within the exons
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Analysis of a screen for positive selection in the genes of the SARS-CoV-2 interactome.
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This repository is a template containing scripts to help you build your own nextflow pipeline.
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This repository is a template containing scripts to help you build your own nextflow pipeline.
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Database of public ChIA-PET data to visualise proximal interactions.
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Functional analysis of RNAseq differential expression analysis, on competence mutants. Use of COG annotation for enrichment analysis in Legionella pneumophila.
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Script to detect recombination tracts on the output of an analysis of the SNPs from a donor strain on a transformed bacteria. Project from Léo Hardy and Xavier Charpentier
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This repository is a template containing scripts to help you build your own nextflow pipeline.
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Gene expression in cells expressing the anti-viral protein ISG20 or not. RNAseq analysis and graphic representations.
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Create a Nextflow pipeline for juicer module
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This repository is a template containing scripts to help you build your own nextflow pipeline.
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This repository is a template containing scripts to help you build your own nextflow pipeline.
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Mapping and variant calling of reads on great ape reference genomes. From Julie Plantade.
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Coevolution analysis: Retrieval of orthologs of ComR and RocC in Legionella, alignment and phylogeny.
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This project allows to display the size distribution of genomic intervals inside every bed files located in a given directory
