Commits · 0304aca00d5df565ac26db126d806a87faf05d4b · LBMC / nextflow

Apr 12, 2019
- kallisto: test of in2p3 config file · 0304aca0
  Laurent Modolo authored 5 years ago
  
  0304aca0
- kallisto: add singularity script for ccin2p3 · 5f6b5a6a
  Laurent Modolo authored 5 years ago
  
  5f6b5a6a
- umi_tools: add singularity module · fa64596b
  Laurent Modolo authored 5 years ago
  
  fa64596b
- rm umitools modules to only keep umi_tools · 9fb4e109
  Laurent Modolo authored 5 years ago
  
  9fb4e109
- umi_tools: add docker files · fea9a9ee
  Laurent Modolo authored 5 years ago
  
  fea9a9ee
Apr 09, 2019
- cutadapt: add v2.1 · d280e93a
  Laurent Modolo authored 5 years ago
  
  d280e93a
Mar 29, 2019
- update module list · 5a5e044e
  Laurent Modolo authored 5 years ago
  
  5a5e044e
- update psmn modules · 1f8de176
  Laurent Modolo authored 5 years ago
  
  1f8de176
- hisat2: add v2.1.0 · b150232b
  Laurent Modolo authored 5 years ago
  
  b150232b
- update psmn module and hisat2 config · d51c969a
  Laurent Modolo authored 5 years ago
  
  d51c969a
- Merge branch 'nfontrod/nextflow-master' into dev · 88ce59a0
  Laurent Modolo authored 5 years ago
  
  88ce59a0
- hisat2: add samtools to singularity modules · e5bd9289
  Laurent Modolo authored 5 years ago
  
  e5bd9289
- hisat2: add samtools to docker · 1079c069
  Laurent Modolo authored 5 years ago
  
  1079c069
- hisat2: merge samtools and hisat2 in the process · 59b0f72d
  Laurent Modolo authored 5 years ago
  
  59b0f72d
- hisat2: update process and config to match new format · 58d2e60a
  Laurent Modolo authored 5 years ago
  
  58d2e60a
Mar 28, 2019
- htseq: add v0.11.2 · ad48514d
  Laurent Modolo authored 5 years ago
  
  ad48514d
- update psmn_modules · c46ea8a1
  Laurent Modolo authored 5 years ago
  
  c46ea8a1
Mar 27, 2019
- src/nf_modules/Hisat2/ -> src/nf_modules/hisat2/ · 215c8f71
  nfontrod authored 5 years ago
  
  215c8f71
- Merge branch 'master' of gitlab_lbmc:pipelines/nextflow · 07d9c6ff
  nfontrod authored 5 years ago
  
  07d9c6ff
Mar 26, 2019
- multiqc: add v1.7 · 420b7b9e
  Laurent Modolo authored 5 years ago
  
  420b7b9e
- update changelog for 0.2.9 · 7034a009
  Laurent Modolo authored 5 years ago
  
  v0.2.9
  
  7034a009
- update module list · ada3ed2b
  Laurent Modolo authored 5 years ago
  
  ada3ed2b
- fastp: add nf modules files · 0d0e5587
  Laurent Modolo authored 5 years ago
  
  0d0e5587
Mar 25, 2019
- update psmn modules · 3ba7b4a1
  Laurent Modolo authored 5 years ago
  
  3ba7b4a1
- fastp: add singularity and docker files · c0582237
  Laurent Modolo authored 5 years ago
  
  c0582237
- fix subread path ion build.sh · b7ff7a02
  Laurent Modolo authored 5 years ago
  
  b7ff7a02
- fix subread version in path · 558d45ee
  Laurent Modolo authored 5 years ago
  
  558d45ee
- subread: add singularity and docker files · cbf75eb1
  Laurent Modolo authored 5 years ago
  
  cbf75eb1
- update psmn modules · 0016d12b
  Laurent Modolo authored 5 years ago
  
  0016d12b
Mar 22, 2019
- update psmn modules · 42a6ea9c
  Laurent Modolo authored 6 years ago
  
  42a6ea9c
- update module list · 1158f515
  Laurent Modolo authored 6 years ago
  
  1158f515
- umitools: add docker and singularity files · edfb1092
  Laurent Modolo authored 6 years ago
  
  edfb1092
- umitools: add docker files · 66fddcca
  Laurent Modolo authored 6 years ago
  
  66fddcca
- psmn: remove mail report from config files · 016b5b22
  Laurent Modolo authored 6 years ago
  
  016b5b22
Mar 21, 2019
- update psmn modules · 7a82274f
  Laurent Modolo authored 6 years ago
  
  7a82274f
- add tests for macs2 · 5d14ce0b
  Laurent Modolo authored 6 years ago
  
  5d14ce0b
Mar 20, 2019
- macs2: add nf module file · 72ffaf95
  Laurent Modolo authored 6 years ago
  
  72ffaf95
- macs2: fix version number in singularity build · 6213625d
  Laurent Modolo authored 6 years ago
  
  6213625d
- update psmn modules · af822187
  Laurent Modolo authored 6 years ago
  
  af822187
- fix training_dataset pipeline · 7fa6b2d4
  Laurent Modolo authored 6 years ago
  
  7fa6b2d4