hisat2: merge samtools and hisat2 in the process (59b0f72d) · Commits · LBMC / nextflow · GitLab

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59b0f72d

Verified Commit 59b0f72d authored 5 years ago by Laurent Modolo

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hisat2: merge samtools and hisat2 in the process

parent 58d2e60a

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src/nf_modules/hisat2/bam_converter.nf 0 additions, 32 deletions

src/nf_modules/hisat2/bam_converter.nf
src/nf_modules/hisat2/hisat2.config 0 additions, 54 deletions

src/nf_modules/hisat2/hisat2.config
src/nf_modules/hisat2/hisat2.nf 0 additions, 138 deletions

src/nf_modules/hisat2/hisat2.nf
src/nf_modules/hisat2/indexing.config 2 additions, 2 deletions

src/nf_modules/hisat2/indexing.config
src/nf_modules/hisat2/indexing.nf 1 addition, 1 deletion

src/nf_modules/hisat2/indexing.nf
src/nf_modules/hisat2/mapping_paired.nf 14 additions, 3 deletions

src/nf_modules/hisat2/mapping_paired.nf
src/nf_modules/hisat2/mapping_single.nf 14 additions, 3 deletions

src/nf_modules/hisat2/mapping_single.nf
src/nf_modules/hisat2/tests.sh 31 additions, 13 deletions

src/nf_modules/hisat2/tests.sh

with 62 additions and 246 deletions

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