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Unverified Commit edfb1092 authored by Laurent Modolo's avatar Laurent Modolo
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umitools: add docker and singularity files

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#/bin/sh
sudo singularity build --force bin/umitools:0.3.4.sif docker://quay.io/biocontainers/umitools:0.3.4--py37_1 && \
singularity sign bin/umitools:0.3.4.sif
Bootstrap: docker
From: ubuntu:18.04
%labels
MAINTAINER Laurent Modolo
%post
UMITOOLS_VERSION=0.3.4
PACKAGES="git \
build-essential \
python-pip \
ca-certificates \
python-setuptools \
python-dev \
python-numpy \
python-wheel \
zlib1g-dev"
apt-get update && \
apt-get install -y --no-install-recommends ${PACKAGES} && \
apt-get clean
pip install umitools==${UMITOOLS_VERSION}
%environment
export UMITOOLS_VERSION=0.3.4
%runscript
exec /bin/bash "$@"
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