Commits · 3d96bc3357d7b9904b678f4eaccfa8b136db392e · Xavier Grand / ChIPster

18 Jun, 2018 5 commits
- kallisto.config: update to the last kallisto version · 3d96bc33
  Laurent Modolo authored Jun 18, 2018
  
  3d96bc33
- Kallisto/0.44.0: add Dockerfile · e9a183e3
  Laurent Modolo authored Jun 18, 2018
  
  e9a183e3
- Kallisto/0.44.0 : add docker files · b9807a5c
  Laurent Modolo authored Jun 18, 2018
  
  b9807a5c
- update sge_modules · edeaacfe
  Laurent Modolo authored Jun 18, 2018
  
  edeaacfe
- doc/Makefile: add TP_computational_biologists · db7ff2e3
  Laurent Modolo authored Jun 18, 2018
  
  db7ff2e3
07 Jun, 2018 3 commits
- README.md : add infos on forking and syncing · 4b81bc8b
  Laurent Modolo authored Jun 07, 2018
  
  4b81bc8b
- paired.nf files : pass the pair_id information in output · 5236de95
  Laurent Modolo authored Jun 07, 2018
  
  5236de95
- bedtools.nf: fix fasta params · 39257434
  Laurent Modolo authored Jun 07, 2018
  
  39257434
06 Jun, 2018 18 commits
- UrQt: Dockerfile fix git version · a2d065e4
  Laurent Modolo authored Jun 06, 2018
  
  a2d065e4
- TP.md: add nextflow options · 6289b049
  Laurent Modolo authored Jun 06, 2018
  
  6289b049
- Merge branch 'master' of gitlab_lbmc:pipelines/nextflow · b8f2a45f
  Laurent Modolo authored Jun 06, 2018
  
  b8f2a45f
- add sge config for some modules · 3454e1e8
  Laurent Modolo authored Jun 06, 2018
  
  3454e1e8
- TP.md: fix typo · 1e57a68d
  Laurent Modolo authored Jun 06, 2018
  
  1e57a68d
- TP.md: PSMN section · 98db0358
  Laurent Modolo authored Jun 06, 2018
  
  98db0358
- Kallisto.nf: fix paired end · 0dba9f2b
  Laurent Modolo authored Jun 06, 2018
  
  0dba9f2b
- Kallisto.nf: fix paired name · 1c82c356
  Laurent Modolo authored Jun 06, 2018
  
  1c82c356
- urqt.nf: improve input · a97e28f0
  Laurent Modolo authored Jun 06, 2018
  
  a97e28f0
- trimming: make output channel more clear · 52d58451
  Laurent Modolo authored Jun 06, 2018
  
  52d58451
- TP.md: add info on project visibility · 462e3dd0
  Laurent Modolo authored Jun 06, 2018
  
  462e3dd0
- TP.md: add Kallisto section · efbf5499
  Laurent Modolo authored Jun 06, 2018
  
  efbf5499
- TP.md: add bedtool section · 955c41f2
  Laurent Modolo authored Jun 06, 2018
  
  955c41f2
- BEDtools: add tests files · b6575e65
  Laurent Modolo authored Jun 06, 2018
  
  b6575e65
- UrQt: fix docker container version · 4d440098
  Laurent Modolo authored Jun 06, 2018
  
  4d440098
- mv test.sh file from docker_modules to nf_modules · 8aee48b9
  Laurent Modolo authored Jun 06, 2018
  
  8aee48b9
- doc: add webide.png · d254a0d5
  Laurent Modolo authored Jun 06, 2018
  
  d254a0d5
- TP.md: add cutadapt.config section · 7449f56c
  Laurent Modolo authored Jun 06, 2018
  
  7449f56c
05 Jun, 2018 14 commits
- TP.md: add cutadapt and urqt section · f495e035
  Laurent Modolo authored Jun 05, 2018
  
  f495e035
- TP.md: fasta_sampler section · 8a2d1d85
  Laurent Modolo authored Jun 05, 2018
  
  8a2d1d85
- TP.md: add definition of process and channel · 46372ef3
  Laurent Modolo authored Jun 05, 2018
  
  46372ef3
- TP.md: add correction · 4ef2883d
  Laurent Modolo authored Jun 05, 2018
  
  4ef2883d
- TP.md: add nf_modules section · a0c710af
  Laurent Modolo authored Jun 05, 2018
  
  a0c710af
- TP.md: add sge_module section · 206b5fa6
  Laurent Modolo authored Jun 05, 2018
  
  206b5fa6
- TP.md: write docker_modules section · 4bd58c06
  Laurent Modolo authored Jun 05, 2018
  
  4bd58c06
- README.md : fix docker path · e4c2f33f
  Laurent Modolo authored Jun 05, 2018
  
  e4c2f33f
- docker_modules: fix path · 1c45e57b
  Laurent Modolo authored Jun 05, 2018
  
  1c45e57b
- mv nf files to nf_modules · 705226a9
  Laurent Modolo authored Jun 05, 2018
  
  705226a9
- correctly mv nf_modules · 4fa9a1b1
  Laurent Modolo authored Jun 05, 2018
  
  4fa9a1b1
- mv nf_modules to docker_modules · f51bf1e4
  Laurent Modolo authored Jun 05, 2018
  
  f51bf1e4
- TP_experimental_biologists.md: add project organisation section · 6630bba3
  Laurent Modolo authored Jun 05, 2018
  
  6630bba3
- doc : add img folder for the TP · d5897bfa
  Laurent Modolo authored Jun 05, 2018
  
  d5897bfa