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Xavier Grand
ChIPster
Commits
3d96bc33
Verified
Commit
3d96bc33
authored
Jun 18, 2018
by
Laurent Modolo
Browse files
kallisto.config: update to the last kallisto version
parent
e9a183e3
Changes
1
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src/nf_modules/Kallisto/kallisto.config
View file @
3d96bc33
...
...
@@ -4,17 +4,17 @@ profiles {
docker
.
enabled
=
true
process
{
$
index_fasta
{
container
=
"kallisto:0.4
3.1
"
container
=
"kallisto:0.4
4.0
"
}
$
mapping_fastq
{
container
=
"kallisto:0.4
3.1
"
container
=
"kallisto:0.4
4.0
"
}
}
}
sge
{
process
{
$
index_fasta
{
beforeScript
=
"module purge; module load Kallisto/0.4
3.1
"
beforeScript
=
"module purge; module load Kallisto/0.4
4.0
"
executor
=
"sge"
cpus
=
1
memory
=
"5GB"
...
...
@@ -25,7 +25,7 @@ profiles {
penv
=
'openmp8'
}
$
mapping_fastq
{
beforeScript
=
"module purge; module load Kallisto/0.4
3.1
"
beforeScript
=
"module purge; module load Kallisto/0.4
4.0
"
executor
=
"sge"
cpus
=
4
memory
=
"5GB"
...
...
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