Commit dae2c35f authored by nfontrod's avatar nfontrod
Browse files

src/commands.sh: modification of metaexon file of exons regulated or in a gene...

src/commands.sh: modification of metaexon file of exons regulated or in a gene containing exons regulated by DDX5/17 near or Far from CTCF
parent ccd2678b
......@@ -475,15 +475,15 @@ for i in ${!list_names[*]}; do
--region_bed results/bed_file/${bed} \
--region_name ${cname} \
--output results/figures/ \
--border_name exon_start exon_stop \
--border_name " " " " \
--environment 10000 25 \
--show_replicate n \
--figure_type metagene \
--nb_bin 100 \
--nb_bin 30 \
-y 0.15 0.4 \
--norm "results/figures/coef_table/tmp_cov_table_design_exp_all_replicates_${nbed}_100bin_10000_nt-around-25-bin_bin0_norm.txt"
mv results/figures/metagene_${cname}_100bin_10000_nt-around-25-bin_file_norm.pdf results/figures/all_replicates_metagene_${cname}_100bin_10000_nt-around-25-bin_file_norm.pdf
mv results/figures/metagene_${cname}_30bin_10000_nt-around-25-bin_file_norm.pdf results/figures/all_replicates_metagene_${cname}_100bin_10000_nt-around-25-bin_file_norm.pdf
done
## Recap
......
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