Commits · fa64596b2767bc5646a80440a96724d81fb7937e · LBMC / nextflow

"src/nf_modules/HTSeq/tests" did not exist on "f51bf1e4d50dd21bfe4e01d9f4251c0fac2d2a9a"

Apr 12, 2019
- umi_tools: add singularity module · fa64596b
  Laurent Modolo authored 6 years ago
  
  fa64596b
- rm umitools modules to only keep umi_tools · 9fb4e109
  Laurent Modolo authored 6 years ago
  
  9fb4e109
Apr 09, 2019
- cutadapt: add v2.1 · d280e93a
  Laurent Modolo authored 6 years ago
  
  d280e93a
Mar 29, 2019
- hisat2: add v2.1.0 · b150232b
  Laurent Modolo authored 6 years ago
  
  b150232b
- hisat2: add samtools to singularity modules · e5bd9289
  Laurent Modolo authored 6 years ago
  
  e5bd9289
Mar 28, 2019
- htseq: add v0.11.2 · ad48514d
  Laurent Modolo authored 6 years ago
  
  ad48514d
Mar 26, 2019
- multiqc: add v1.7 · 420b7b9e
  Laurent Modolo authored 6 years ago
  
  420b7b9e
Mar 25, 2019
- fastp: add singularity and docker files · c0582237
  Laurent Modolo authored 6 years ago
  
  c0582237
- fix subread path ion build.sh · b7ff7a02
  Laurent Modolo authored 6 years ago
  
  b7ff7a02
- fix subread version in path · 558d45ee
  Laurent Modolo authored 6 years ago
  
  558d45ee
- subread: add singularity and docker files · cbf75eb1
  Laurent Modolo authored 6 years ago
  
  cbf75eb1
Mar 22, 2019
- umitools: add docker and singularity files · edfb1092
  Laurent Modolo authored 6 years ago
  
  edfb1092
Mar 20, 2019
- macs2: fix version number in singularity build · 6213625d
  Laurent Modolo authored 6 years ago
  
  6213625d
- cleanup · 466efb3e
  Laurent Modolo authored 6 years ago
  
  466efb3e
- script to help docker to singularity conversion · 71977cb5
  Laurent Modolo authored 6 years ago
  
  71977cb5
- add singularity files for macs2 · bd597312
  Laurent Modolo authored 6 years ago
  
  bd597312
- add singularity and docker files for macs2 · 16b188fc
  Laurent Modolo authored 6 years ago
  
  16b188fc
Mar 07, 2019
- music: fix containers and tests · cc9f3d11
  Laurent Modolo authored 6 years ago
  
  cc9f3d11
Mar 05, 2019
- singularity build.sh: add error catch on build · 789625d7
  Laurent Modolo authored 6 years ago
  
  789625d7
- ucsc: add singularity files · d98673b6
  Laurent Modolo authored 6 years ago
  
  d98673b6
- trimmomatic: add singularity files · f645f605
  Laurent Modolo authored 6 years ago
  
  f645f605
- tophat: add singularity files · ebf79d0c
  Laurent Modolo authored 6 years ago
  
  ebf79d0c
Mar 04, 2019
- sratoolkit: add singularity files · 976e5e03
  Laurent Modolo authored 6 years ago
  
  976e5e03
- samblaster: add singularity files · fe2a22eb
  Laurent Modolo authored 6 years ago
  
  fe2a22eb
- salmon: add singularity files · 086ccdb8
  Laurent Modolo authored 6 years ago
  
  086ccdb8
- rsem: add singularity files · 54834540
  Laurent Modolo authored 6 years ago
  
  54834540
- pigz: add singularity files · 97f4337f
  Laurent Modolo authored 6 years ago
  
  97f4337f
- picard: add PicardCommandLine for singularity · a8472a83
  Laurent Modolo authored 6 years ago
  
  a8472a83
- picard: add singularity files · 8e82fe73
  Laurent Modolo authored 6 years ago
  
  8e82fe73
- samtools: add singularity files · 4a1b22a8
  Laurent Modolo authored 6 years ago
  
  4a1b22a8
- multiqc: add singularity files · dffc6644
  Laurent Modolo authored 6 years ago
  
  dffc6644
- kallisto: add singularity files · 2c69d031
  Laurent Modolo authored 6 years ago
  
  2c69d031
- htseq: add singularity files · ceabe427
  Laurent Modolo authored 6 years ago
  
  ceabe427
- hisat2: add singularity files · e8fe1028
  Laurent Modolo authored 6 years ago
  
  e8fe1028
- gatk: add singularity files · 7a4d983c
  Laurent Modolo authored 6 years ago
  
  7a4d983c
- deeptools: add singularity files · 9fe7ac40
  Laurent Modolo authored 6 years ago
  
  9fe7ac40
- file_handle: add singularity files · 220f0ecf
  Laurent Modolo authored 6 years ago
  
  220f0ecf
- cutadapt: add singularity files · 870693e5
  Laurent Modolo authored 6 years ago
  
  870693e5
- canu: add singularity files · adcfbaad
  Laurent Modolo authored 6 years ago
  
  adcfbaad
- bioawk: add singularity files · 259e4d5b
  Laurent Modolo authored 6 years ago
  
  259e4d5b