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Unverified Commit 16b188fc authored by Laurent Modolo's avatar Laurent Modolo
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add singularity and docker files for macs2

parent 666c81d1
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FROM ubuntu:18.04
MAINTAINER Laurent Modolo
ENV MACS_VERSION=2.1.1.20160309
ENV PACKAGES git=1:2.17* \
build-essential=12.4* \
python-pip=9.0.1* \
ca-certificates=20180409 \
python-setuptools=39.0.1* \
python-dev=2.7* \
python-numpy=1:1.13* \
python-wheel=0.30.0* \
zlib1g-dev=1:1.2.11*
RUN apt-get update && \
apt-get install -y --no-install-recommends ${PACKAGES} && \
apt-get clean
RUN pip install MACS2==${MACS_VERSION}
#!/bin/sh
docker build src/docker_modules/macs2/2.1.0 -t 'macs2:2.1.0'
FROM quay.io/biocontainers/macs2:2.1.2--py27r351h14c3975_1
MAINTAINER Laurent Modolo
#!/bin/sh
docker build src/docker_modules/macs2/2.1.2 -t 'macs2:2.1.2'
#/bin/sh
sudo singularity build --force bin/bowtie:1.2.2.sif src/singularity_modules/bowtie/1.2.2/bowtie.def && \
singularity sign bin/bowtie:1.2.2.sif
#/bin/sh
sudo singularity build --force bin/macs2:2.1.1--py27r351h14c3975_1.sif docker://quay.io/biocontainers/macs2:2.1.2--py27r351h14c3975_1 && \
singularity sign bin/macs2:2.1.1--py27r351h14c3975_1.sif
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