Commits · b7ff7a02195feaf530b151cfb73f8ec2608026c2 · LBMC / nextflow

Mar 25, 2019
- fix subread path ion build.sh · b7ff7a02
  Laurent Modolo authored 5 years ago
  
  b7ff7a02
- fix subread version in path · 558d45ee
  Laurent Modolo authored 5 years ago
  
  558d45ee
- subread: add singularity and docker files · cbf75eb1
  Laurent Modolo authored 5 years ago
  
  cbf75eb1
- update psmn modules · 0016d12b
  Laurent Modolo authored 5 years ago
  
  0016d12b
Mar 22, 2019
- update psmn modules · 42a6ea9c
  Laurent Modolo authored 6 years ago
  
  42a6ea9c
- update module list · 1158f515
  Laurent Modolo authored 6 years ago
  
  1158f515
- umitools: add docker and singularity files · edfb1092
  Laurent Modolo authored 6 years ago
  
  edfb1092
- umitools: add docker files · 66fddcca
  Laurent Modolo authored 6 years ago
  
  66fddcca
- psmn: remove mail report from config files · 016b5b22
  Laurent Modolo authored 6 years ago
  
  016b5b22
Mar 21, 2019
- update psmn modules · 7a82274f
  Laurent Modolo authored 6 years ago
  
  7a82274f
- add tests for macs2 · 5d14ce0b
  Laurent Modolo authored 6 years ago
  
  5d14ce0b
Mar 20, 2019
- macs2: add nf module file · 72ffaf95
  Laurent Modolo authored 6 years ago
  
  72ffaf95
- macs2: fix version number in singularity build · 6213625d
  Laurent Modolo authored 6 years ago
  
  6213625d
- update psmn modules · af822187
  Laurent Modolo authored 6 years ago
  
  af822187
- fix training_dataset pipeline · 7fa6b2d4
  Laurent Modolo authored 6 years ago
  
  7fa6b2d4
- cleanup · 466efb3e
  Laurent Modolo authored 6 years ago
  
  466efb3e
- script to help docker to singularity conversion · 71977cb5
  Laurent Modolo authored 6 years ago
  
  71977cb5
- add singularity files for macs2 · bd597312
  Laurent Modolo authored 6 years ago
  
  bd597312
- add singularity and docker files for macs2 · 16b188fc
  Laurent Modolo authored 6 years ago
  
  16b188fc
Mar 13, 2019
- samblaster: fix test.sh · 666c81d1
  Laurent Modolo authored 6 years ago
  
  666c81d1
Mar 07, 2019
- music: fix containers and tests · cc9f3d11
  Laurent Modolo authored 6 years ago
  
  cc9f3d11
- rsem: fix tests · 099b8b5e
  Laurent Modolo authored 6 years ago
  
  099b8b5e
Mar 06, 2019
- music: fix tests · 7b7eab24
  Laurent Modolo authored 6 years ago
  
  7b7eab24
- music: fix dockerfile · 169283c6
  Laurent Modolo authored 6 years ago
  
  169283c6
- update psmn_modules · 760da7c8
  Laurent Modolo authored 6 years ago
  
  760da7c8
- htseq: fix Dockerfile · 6c0e0c9d
  Laurent Modolo authored 6 years ago
  
  6c0e0c9d
- bwa: fix warining in tests · d0a65940
  Laurent Modolo authored 6 years ago
  
  d0a65940
- nf_modules: add singularity in config files and tests.sh · f720ba52
  Laurent Modolo authored 6 years ago
  
  f720ba52
- deeptools: add singularity to files · dde8e8a2
  Laurent Modolo authored 6 years ago
  
  dde8e8a2
- cutadapt: add singularity to nf files and add -resume to all tests.sh · 60040ed6
  Laurent Modolo authored 6 years ago
  
  60040ed6
- nf_modules: update config files to match psmn lowercase module names · 80b5c871
  Laurent Modolo authored 6 years ago
  
  80b5c871
- update_tools.sh: add update tool for psmn module · 67f677d7
  Laurent Modolo authored 6 years ago
  
  67f677d7
Mar 05, 2019
- update psmn_modules to lowercase version · 5b10d565
  Laurent Modolo authored 6 years ago
  
  5b10d565
- update psmn_modules · f0625618
  Laurent Modolo authored 6 years ago
  
  f0625618
- update_tools.sh: auto update for singularity docker and nf modules · 45ce7f4b
  Laurent Modolo authored 6 years ago
  
  45ce7f4b
- singularity build.sh: add error catch on build · 789625d7
  Laurent Modolo authored 6 years ago
  
  789625d7
- ucsc: add singularity files · d98673b6
  Laurent Modolo authored 6 years ago
  
  d98673b6
- trimmomatic: add singularity files · f645f605
  Laurent Modolo authored 6 years ago
  
  f645f605
- tophat: add singularity files · ebf79d0c
  Laurent Modolo authored 6 years ago
  
  ebf79d0c
Mar 04, 2019
- sratoolkit: add singularity files · 976e5e03
  Laurent Modolo authored 6 years ago
  
  976e5e03