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Verified Commit 53ac9470 authored by Laurent Modolo's avatar Laurent Modolo
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ucsc: rm wig2bedgraph process

parent e9946c0d
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......@@ -35,28 +35,6 @@ sort -T ./ -k1,1 -k2,2n ${bg} > \
"""
}
params.wig2bedgraph = ""
params.wig2bedgraph_out = ""
process wig2bedgraph {
container = "${container_url}"
label "big_mem_mono_cpus"
tag "${file_id}"
if (params.wig2bedgraph_out != "") {
publishDir "results/${params.wig2bedgraph_out}", mode: 'copy'
}
input:
tuple val(file_id) path(wig)
output:
tuple val(file_id), path("*.bg"), emit: bedgraph
script:
"""
wigToBedGraph ${wig} ${wig.simpleName}.bg
"""
}
params.wig_to_bedgraph = ""
params.wig_to_bedgraph_out = ""
process wig_to_bedgraph {
......
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