Skip to content
Snippets Groups Projects
Unverified Commit f34f7a0b authored by Nicolas Servant's avatar Nicolas Servant Committed by GitHub
Browse files

Update main.nf

parent 40b544c8
No related branches found
No related tags found
No related merge requests found
...@@ -128,10 +128,6 @@ if ( params.bwt2_index ){ ...@@ -128,10 +128,6 @@ if ( params.bwt2_index ){
} }
else if ( params.fasta ) { else if ( params.fasta ) {
//lastPath = params.fasta.lastIndexOf(File.separator)
//fasta_base = params.fasta.substring(lastPath+1)
//fasta_base = fasta_base.toString() - ~/(\.fa)?(\.fasta)?(\.fas)?(\.fsa)?$/
Channel.fromPath( params.fasta ) Channel.fromPath( params.fasta )
.ifEmpty { exit 1, "Genome index: Fasta file not found: ${params.fasta}" } .ifEmpty { exit 1, "Genome index: Fasta file not found: ${params.fasta}" }
.into { fasta_for_index } .into { fasta_for_index }
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Please register or to comment