diff --git a/main.nf b/main.nf index 349b265e25f059770631bb9912537ede4871fa46..a8611d564b4a7d9d029e0549976ceaa69afb93f4 100644 --- a/main.nf +++ b/main.nf @@ -128,10 +128,6 @@ if ( params.bwt2_index ){ } else if ( params.fasta ) { - //lastPath = params.fasta.lastIndexOf(File.separator) - //fasta_base = params.fasta.substring(lastPath+1) - //fasta_base = fasta_base.toString() - ~/(\.fa)?(\.fasta)?(\.fas)?(\.fsa)?$/ - Channel.fromPath( params.fasta ) .ifEmpty { exit 1, "Genome index: Fasta file not found: ${params.fasta}" } .into { fasta_for_index }