Commits · 6ae6019e8b7618f22e8e6dbb8869c6a155015130 · Xavier Grand / bolero

Oct 10, 2024
- Clean params deprecated. · 6ae6019e
  Xavier Grand authored 5 months ago
  
  1.0
  
  6ae6019e
- Add default ont-guppy option to basecalling, --model-file · 5b5b8501
  Xavier Grand authored 5 months ago
  
  5b5b8501
- Add default ont-guppy option to basecalling, --model-file · b4d75c61
  Xavier Grand authored 5 months ago
  
  b4d75c61
- Add default ont-guppy option to basecalling, --model-file · 4082c898
  Xavier Grand authored 5 months ago
  
  4082c898
- Add default ont-guppy option to basecalling, --model-file · 6b32f9dc
  Xavier Grand authored 5 months ago
  
  6b32f9dc
Oct 07, 2024
- Modif Pollux profile · fbc4a8cc
  Xavier Grand authored 5 months ago
  
  fbc4a8cc
- config file pollux profile · f4947033
  Xavier Grand authored 5 months ago
  
  f4947033
Oct 04, 2024
- Modif pollux profile · 2c7e1db0
  Xavier Grand authored 5 months ago
  
  2c7e1db0
Oct 03, 2024
- modif profile pollux suppress scratch* · 8020ff27
  Xavier Grand authored 5 months ago
  
  8020ff27
- modif profile pollux suppress scratch* · e84a0ce1
  Xavier Grand authored 5 months ago
  
  e84a0ce1
- README.md · 08a45638
  Xavier Grand authored 5 months ago
  
  08a45638
Sep 24, 2024
- Modif README and help section of bolero.nf · 15b6b64d
  Xavier Grand authored 5 months ago
  
  15b6b64d
- Test seqkit version 2.5.1 · 78029593
  Xavier Grand authored 5 months ago
  
  78029593
- Modif Execution summary · 43874f90
  Xavier Grand authored 5 months ago
  
  43874f90
- Modif profile singularity in nextflow.config · 0754f971
  Xavier Grand authored 5 months ago
  
  0754f971
- Add pollux_noslurm profile in nextflow.config · c728ce7b
  Xavier Grand authored 5 months ago
  
  c728ce7b
- Modif gtf parameter in bolero.nf · cd8335c7
  Xavier Grand authored 5 months ago
  
  cd8335c7
Sep 23, 2024
- Restore seqkit v2.1.0 · 5c484105
  Xavier Grand authored 5 months ago
  
  5c484105
- Modif Help bolero.nf · e97e749f
  Xavier Grand authored 5 months ago
  
  e97e749f
Sep 17, 2024
- concatenate repair. · 3215b471
  Xavier Grand authored 5 months ago
  
  3215b471
Sep 16, 2024
- README.md modif · 5c68bca6
  Xavier Grand authored 6 months ago
  
  5c68bca6
- README.md modif · ec0bb7c1
  Xavier Grand authored 6 months ago
  
  ec0bb7c1
- Some cleaning. · 3b275df6
  Xavier Grand authored 6 months ago
  
  3b275df6
- Add simulation source file to reproduce HBV transcriptome with pbsim3 · ea00fa80
  Xavier Grand authored 6 months ago
  
  ea00fa80
Sep 12, 2024
- Correction README.md suppress gtf option · 7bd3beeb
  Xavier Grand authored 6 months ago
  
  7bd3beeb
Sep 11, 2024
- include guppy only if skipBC is False. · 484a7db0
  Xavier Grand authored 6 months ago
  
  484a7db0
- README.md update · 36fe9db9
  Xavier Grand authored 6 months ago
  
  36fe9db9
Aug 09, 2024
- Modif multi cpus to junction nanosplicer and rebuild docker. · 8fa681cb
  Xavier Grand authored 7 months ago
  
  8fa681cb
- Modif r-bolero version junction-nanosplicer module · 02e29a36
  Xavier Grand authored 7 months ago
  
  02e29a36
- Modify input to start_positions to multithreading and rebuild docker. · c6c0db92
  Xavier Grand authored 7 months ago
  
  c6c0db92
- Modify label to multi cpus of rna_count and start_positions modules. · 18e4119a
  Xavier Grand authored 7 months ago
  
  18e4119a
Jul 12, 2024
- Typo dans src/.docker_modules/r-bolero/1.2/HBV_RNAs_count.R · 99fd30d8
  Xavier Grand authored 8 months ago
  
  99fd30d8
Jul 11, 2024
- modif concatenate/main.nf · 77ffd261
  Xavier Grand authored 8 months ago
  
  77ffd261
- nextflow.config · f158995c
  Xavier Grand authored 8 months ago
  
  f158995c
- nextflow.config · b6c22230
  Xavier Grand authored 8 months ago
  
  b6c22230
- nextflow.config · 029c2816
  Xavier Grand authored 8 months ago
  
  029c2816
- nextflow.config · 52d19c9a
  Xavier Grand authored 8 months ago
  
  52d19c9a
Jul 10, 2024
- Docker r-bolero 1.2 docker profile functionning · 65ac98b5
  Xavier Grand authored 8 months ago
  
  65ac98b5
Jul 04, 2024
- Suppress params.5p_seq because raise error · b94c5d26
  Xavier Grand authored 8 months ago
  
  b94c5d26
Jul 02, 2024
- Modify README.md · 76648e76
  Xavier Grand authored 8 months ago
  
  76648e76