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Commit e83abf7a authored by Xavier Grand's avatar Xavier Grand
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minor modif porechop/main.nf --input ../

parent 614ced31
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......@@ -19,6 +19,6 @@ process porechop {
"""
mkdir ${barcode}
cd ${barcode}/
porechop --input \$(readlink -f ../${fastq}) -o ${barcode}_merged_porechoped.fastq.gz --threads ${task.cpus}
porechop --input ../${fastq} -o ${barcode}_merged_porechoped.fastq.gz --threads ${task.cpus}
"""
}
\ No newline at end of file
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