Commits · 6fd6cf2f6343d9dca8695265ee01e542bde1ad41 · Xavier Grand / ChIPster · GitLab

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Nov 05, 2019
- README.md: mv getting started in a new file · 6fd6cf2f
  Laurent Modolo authored 5 years ago
  
  6fd6cf2f
Jul 18, 2019
- fastqdump.nf: force tmp file to be in the right place · 01dac1f9
  Laurent Modolo authored 5 years ago
  
  01dac1f9
Jun 12, 2019
- test of static website · 59dbabfe
  Laurent Modolo authored 5 years ago
  
  59dbabfe
Jun 11, 2019
- fastp singularity: fix sps and pbs path · 155268f9
  Laurent Modolo authored 5 years ago
  
  155268f9
- subread singularity: fix sps and pbs path · b3aee972
  Laurent Modolo authored 5 years ago
  
  b3aee972
Jun 07, 2019
- bowtie nf: change report max size from 15 line to 19 · 78cf7e3c
  Laurent Modolo authored 5 years ago
  
  78cf7e3c
- htseq: fix singularity config · da3831bb
  Laurent Modolo authored 5 years ago
  
  da3831bb
- subread nf: add nf config and test files · f92cde7c
  Laurent Modolo authored 5 years ago
  
  f92cde7c
- bowtie: nf fix pair_id var call · 44e1391d
  Laurent Modolo authored 5 years ago
  
  44e1391d
- bowtie: nf, only keep 15 last lines of report · 92f8f605
  Laurent Modolo authored 5 years ago
  
  92f8f605
- bowtie2: nf, only keep last 15 lines of report · 0977ef07
  Laurent Modolo authored 5 years ago
  
  0977ef07
Jun 04, 2019
- nextflow.pbs: change dag from pdf to html · b2d7e719
  Laurent Modolo authored 5 years ago
  
  b2d7e719
- nextflow.pbs: change position of NF option to facilitate bug tracking · 787e9c42
  Laurent Modolo authored 5 years ago
  
  787e9c42
May 29, 2019
- Docker modules: add "ps" to debian img · b5141d92
  Laurent Modolo authored 5 years ago
  
  b5141d92
May 28, 2019
- fastqdump: fix singularity image name · e491cdc7
  Laurent Modolo authored 5 years ago
  
  e491cdc7
- multiqc: singularity fix env variable problem · 3c7e5740
  Laurent Modolo authored 5 years ago
  
  3c7e5740
- multiqc: add missing singulairy test · 6a330a3a
  Laurent Modolo authored 5 years ago
  
  6a330a3a
May 23, 2019
- CHANGELOG: add v0.3.0 · d72cbbf1
  Laurent Modolo authored 5 years ago
  
  d72cbbf1
May 22, 2019
- nextflow.pbs: give a hint that the results folder should be a parameter · bbc6d352
  Laurent Modolo authored 5 years ago
  
  of the pipe
  v0.3.0
  
  bbc6d352
- nextflow.pbs: fix pbs example · e25a64b9
  Laurent Modolo authored 5 years ago
  
  e25a64b9
- singularity r: add ps to debian container · 0bb0525d
  Laurent Modolo authored 5 years ago
  
  0bb0525d
- clarify example.pbs · 8d5f0314
  Laurent Modolo authored 5 years ago
  
  8d5f0314
May 21, 2019
- singularity modules: add r.3.5.3 · 8a6217da
  Laurent Modolo authored 5 years ago
  
  8a6217da
- singularity: add ps command to debian containers · 9f50974d
  Laurent Modolo authored 5 years ago
  
  9f50974d
- nf modules singularity: remove logs for in2p3 · f8fe5b84
  Laurent Modolo authored 5 years ago
  
  f8fe5b84
May 20, 2019
- singularity modules: fix typo in .def files · f3591b54
  Laurent Modolo authored 5 years ago
  
  f3591b54
- nf modules: adapt ccin2p3 profile to use singularity · 6cccaa96
  Laurent Modolo authored 5 years ago
  
  6cccaa96
- nf modules: add ccin2p3 profile · e170dad3
  Laurent Modolo authored 5 years ago
  
  e170dad3
- nf module: ccin2p3 profile become cc2inp3_conda · 78189351
  Laurent Modolo authored 5 years ago
  
  78189351
- singularity modules: add /sps /pbs and /scratch for ccin2p3 · 9737cccf
  Laurent Modolo authored 5 years ago
  
  9737cccf
- in2p3 test: make singularity default for ccin2p3 · 09e2b2fc
  Laurent Modolo authored 5 years ago
  
  09e2b2fc
- in2p3 test: change pos of --bind option for singularity... · 883c3c3e
  Laurent Modolo authored 5 years ago
  
  883c3c3e
- in2p3 test: add singularity bind option · 0f3a7c43
  Laurent Modolo authored 5 years ago
  
  0f3a7c43
- in2p3 test: fix beforeScript config · f6921da8
  Laurent Modolo authored 5 years ago
  
  f6921da8
- in2p3: test singylarity mount bind config · b6101c65
  Laurent Modolo authored 5 years ago
  
  b6101c65
- in2p3: test singularity automount · 854a1709
  Laurent Modolo authored 5 years ago
  
  854a1709
- in2p3 singularity: fix logs path · 9e61e551
  Laurent Modolo authored 5 years ago
  
  9e61e551
- test in2p3: add more details in mail report · b7d9581d
  Laurent Modolo authored 5 years ago
  
  b7d9581d
- kallisto_index.php: fix fasta path · 00019115
  Laurent Modolo authored 5 years ago
  
  00019115
- kallisto_index.pbs: update pbs · 2568b430
  Laurent Modolo authored 5 years ago
  
  2568b430