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Verified Commit 883c3c3e authored by Laurent Modolo's avatar Laurent Modolo
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in2p3 test: change pos of --bind option for singularity...

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src/nf_modules/kallisto/indexing.config
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...@@ -51,7 +51,7 @@ profiles { ...@@ -51,7 +51,7 @@ profiles {
} }
ccin2p3_singularity { ccin2p3_singularity {
singularity.enabled = true singularity.enabled = true
singularity.engineOptions = "--bind /pbs,/sps,/scratch" singularity.runOptions = "--bind /pbs,/sps,/scratch"
process{ process{
withName: index_fasta { withName: index_fasta {
beforeScript = "export SINGULARITY_BIND=\"/sps,/scratch:/var/singularity/mnt/\"" beforeScript = "export SINGULARITY_BIND=\"/sps,/scratch:/var/singularity/mnt/\""
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