kallisto_index.php: fix fasta path

00019115 · Laurent Modolo · 2568b430 · 00019115
Verified Commit 00019115 authored 5 years ago by Laurent Modolo
--- a/src/kallisto_index.pbs
+++ b/src/kallisto_index.pbs
@@ -25,5 +25,5 @@ PIPELINE=${SCRATCH}/nextflow/src/nf_modules/kallisto/indexing.nf
 CONFIG=${SCRATCH}/nextflow/src/nf_modules/kallisto/indexing.config

 ${NF} ${PIPELINE} -c ${CONFIG} -profile ccin2p3_singularity \
--fasta "${SCRATCH}/nextflow/data/tiny_dataset/fasta/tiny_v2.fasta \
+--fasta "${SCRATCH}/nextflow/data/tiny_dataset/fasta/tiny_v2.fasta" \
 -w "${SCRATCH}"