Commit f3a5fec3 authored by Xavier Grand's avatar Xavier Grand
Browse files

Modif Channel indexed genome.

parent a172d4a7
......@@ -163,7 +163,7 @@ workflow {
// genome_indexed_input = ref_1.concat(ref_2,ref_3,ref_4,ref_5,ref_6,ref_7,ref_8,ref_9,ref_10,ref_11,ref_12,ref_13,ref_14,ref_15)
Channel
.fromPath( "${params.idx}/*" )
.fromPath( "${params.idx}" )
.set { genome_indexed_input }
mapping_withindex(genome_indexed_input.collect(), fastp.out.fastq)
stats_bam(mapping_withindex.out.bam)
......
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