diff --git a/src/RNAseq_XGR.nf b/src/RNAseq_XGR.nf index 0d97c5391d15e5ff79407f802e4aa04f75f5a16a..90f63aa58a423f22543e23307b7d918e912eff5f 100644 --- a/src/RNAseq_XGR.nf +++ b/src/RNAseq_XGR.nf @@ -163,7 +163,7 @@ workflow { // genome_indexed_input = ref_1.concat(ref_2,ref_3,ref_4,ref_5,ref_6,ref_7,ref_8,ref_9,ref_10,ref_11,ref_12,ref_13,ref_14,ref_15) Channel - .fromPath( "${params.idx}/*" ) + .fromPath( "${params.idx}" ) .set { genome_indexed_input } mapping_withindex(genome_indexed_input.collect(), fastp.out.fastq) stats_bam(mapping_withindex.out.bam)