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Commit 543497c6 authored by Xavier Grand's avatar Xavier Grand
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RNAseq_XGR test with Tiny dataset

parent 351bda15
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...@@ -59,7 +59,7 @@ if (params.help || params.h) { ...@@ -59,7 +59,7 @@ if (params.help || params.h) {
*/ */
/* Arguments */ /* Arguments */
params.fastq = "$params.project/*.fastq*" params.fastq = "$params.project/*{1,2}.fastq*"
params.gtf = "" params.gtf = ""
params.fasta = "" params.fasta = ""
params.idx = "" params.idx = ""
...@@ -88,7 +88,6 @@ log.info "Genome index location: ${params.idx}" ...@@ -88,7 +88,6 @@ log.info "Genome index location: ${params.idx}"
Channel Channel
.fromFilePairs( params.fastq, size: -1 ) .fromFilePairs( params.fastq, size: -1 )
.set { fastq_files } .set { fastq_files }
.view()
Channel Channel
.fromPath( params.gtf ) .fromPath( params.gtf )
......
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