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LBMC
ReGArDS
ChIA-PET_network
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a1f2fb6b98953803b74feff7519e160690c02a8f
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chia-pet_network
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Jan 18, 2021
src/find_interaction_cluster/community_figures/fig_functions.py: change in...
· a1f2fb6b
nfontrod
authored
4 years ago
a1f2fb6b
src/find_interaction_cluster/community_figures/*.py: can now perform logit tests
· 3c50729f
nfontrod
authored
4 years ago
3c50729f
src/find_interaction_cluster/community_figures/*.py: add a paramter...
· a90c69e7
nfontrod
authored
4 years ago
a90c69e7
Jan 15, 2021
src/find_interaction_cluster/clip_figures/clip_compo_analyser.py: fix...
· a072ad25
nfontrod
authored
4 years ago
a072ad25
src/find_interaction_cluster/clip_figures/clip_compo_launcher.py: add launcher...
· ef79642f
nfontrod
authored
4 years ago
ef79642f
Jan 13, 2021
src/find_interaction_cluster/clip_figures/clip_compo_analyser.py: launch...
· 5a4fb522
nfontrod
authored
4 years ago
5a4fb522
src/find_interaction_cluster/clip_figures/clip_compo_*: creation of a script...
· 496626e8
nfontrod
authored
4 years ago
496626e8
src/find_interaction_cluster/clip_figures/__main__.py: add a parameter permutation
· b01ba86e
nfontrod
authored
4 years ago
b01ba86e
src/find_interaction_cluster/clip_figures/clip_analyser.py: add a parameter iteration
· fece3a1d
nfontrod
authored
4 years ago
fece3a1d
src/find_interaction_cluster/clip_figures/config.py: add parameter test_clip_file
· e5ad126c
nfontrod
authored
4 years ago
e5ad126c
src/find_interaction_cluster/community_figures/fig_functions.py: add reg-adj...
· 02f9d6b8
nfontrod
authored
4 years ago
02f9d6b8
src/find_interaction_cluster/clip_figures/clip_analyser.py: analyse now the clip density
· fbb7ac9b
nfontrod
authored
4 years ago
fbb7ac9b
Jan 12, 2021
src/find_interaction_cluster/clip_figures/*.py: creation of a module to...
· 706d947a
nfontrod
authored
4 years ago
706d947a
src/find_interaction_cluster/community_figures/fig_functions.py: closing...
· c4cad384
nfontrod
authored
4 years ago
c4cad384
.gitignore: add some files to ignore in tests folder
· a3e79436
nfontrod
authored
4 years ago
a3e79436
tests: test directory
· 04ff702c
nfontrod
authored
4 years ago
04ff702c
src/db_utils/config.py: add a test_files attribute for Config class
· e470b4f3
nfontrod
authored
4 years ago
e470b4f3
src/find_interaction_cluster/__main__.py: docstrig and lazyparser changes for test_type paramter
· af2c94ab
nfontrod
authored
4 years ago
af2c94ab
src/find_interaction_cluster/nt_and_community.py: fix a test in compute_controls_distances
· b13ecc0c
nfontrod
authored
4 years ago
b13ecc0c
src/nt_composition/distance.py: change in compute_controls_distances function
· a9b2a119
nfontrod
authored
4 years ago
a9b2a119
src/find_interaction_cluster/community_figures/fig_functions.py: fix...
· d2e6dcc5
nfontrod
authored
4 years ago
d2e6dcc5
Jan 07, 2021
src/find_interaction_cluster/community_figures/__main__.py: lazyparser...
· cbb0dd0b
nfontrod
authored
4 years ago
cbb0dd0b
src/find_interaction_cluster/community_figures/fig_functions.py: Add a...
· c85e0796
nfontrod
authored
4 years ago
c85e0796
src/nt_composition/{__main__.py, distance.py, make_nt_correlation}: add a...
· d417a37c
nfontrod
authored
4 years ago
d417a37c
Jan 04, 2021
src/find_interaction_cluster/community_figures/fig_functions.py: display dots...
· 09486394
nfontrod
authored
4 years ago
09486394
src/find_interaction_cluster/community_figures/__main__.py: fix constraint of iteration parameter
· 7fda7fc3
nfontrod
authored
4 years ago
7fda7fc3
src/find_interaction_cluster/nt_and_community.py: usage of community_figure new module
· 0e813882
nfontrod
authored
4 years ago
0e813882
src/find_interaction_cluster/community_figures/fig_functions.py: fix lm_with_ctrl function
· a7cf3b21
nfontrod
authored
4 years ago
a7cf3b21
src/find_interaction_cluster/community_figures/fig_functions.py: fix get_permutation_mean function
· 7a8fc9fb
nfontrod
authored
4 years ago
7a8fc9fb
src/find_interaction_cluster/community_figures/fig_functions.py: deletion of...
· 661d27aa
nfontrod
authored
4 years ago
661d27aa
src/find_interaction_cluster/community_figures/*.py: script that creates a...
· 00ca1723
nfontrod
authored
4 years ago
00ca1723
src/find_interaction_cluster/nt_and_community.py: fix make_barplot_perm function
· 74856aba
nfontrod
authored
4 years ago
74856aba
Dec 17, 2020
src/find_interaction_cluster/nt_and_community.py: fix the nucleotide list of interest
· e953b5c6
nfontrod
authored
4 years ago
e953b5c6
Dec 16, 2020
src/find_interaction_cluster/nt_and_community.py: modifications to add the...
· d037363c
nfontrod
authored
4 years ago
d037363c
Nov 27, 2020
src/find_interaction_cluster/__main__.py: modifications to use the adapt functions
· 50acb5a3
nfontrod
authored
4 years ago
50acb5a3
src/find_interaction_cluster/colocalisation_n_ppi_analysis.py: removing the...
· 9a838f6c
nfontrod
authored
4 years ago
9a838f6c
src/find_interaction_cluster/nt_and_community.py: replace lmm name by lm
· 062b1e37
nfontrod
authored
4 years ago
062b1e37
Nov 26, 2020
src/find_interaction_cluster/colocalisation_n_ppi_analysis.py: comparison of...
· 7b9d52ff
nfontrod
authored
4 years ago
7b9d52ff
Nov 25, 2020
src/find_interaction_cluster/nt_and_community.py: fix...
· 523b6c7e
nfontrod
authored
4 years ago
523b6c7e
src/find_interaction_cluster/nt_and_community.py: fix main function to work on all components
· e3e8f1ef
nfontrod
authored
4 years ago
e3e8f1ef
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