src/find_interaction_cluster/config.py: get_community -> get_communities_basefile and creation of a new get_community function

src/find_interaction_cluster/community_figures/fig_functions.py: change in lm_maker_summary to handle logistic regression

src/find_interaction_cluster/community_figures/*.py: add a paramter display_size to display the size of every community

src/find_interaction_cluster/clip_figures/clip_compo_analyser.py: fix create_figure_4_clip_table function

src/find_interaction_cluster/clip_figures/clip_compo_launcher.py: add launcher call at the end of the file

src/find_interaction_cluster/clip_figures/clip_compo_analyser.py: launch create_multiple_figures for every clip file

src/find_interaction_cluster/clip_figures/clip_compo_*: creation of a script to analyse the nucleotide composition of communities enrichied or impoverished in peak density from clip data

src/find_interaction_cluster/community_figures/fig_functions.py: add reg-adj column in the final file

src/find_interaction_cluster/clip_figures/*.py: creation of a module to produce community figures from CLIP files

src/find_interaction_cluster/community_figures/fig_functions.py: closing figures after their creation

src/find_interaction_cluster/community_figures/fig_functions.py: fix get_feature_by_community function

src/find_interaction_cluster/community_figures/__main__.py: lazyparser contrain for output parameter removed + add a parameter sd_community

src/find_interaction_cluster/community_figures/fig_functions.py: Add a parameter sd_community to show or hide communities sd

src/nt_composition/{__main__.py, distance.py, make_nt_correlation}: add a parameter level to study exons but also genes

src/find_interaction_cluster/community_figures/fig_functions.py: display dots instead of bars in make_barplot function

src/find_interaction_cluster/community_figures/fig_functions.py: deletion of unused import and functions + creation of dic_com when the test type is permutation

src/find_interaction_cluster/community_figures/*.py: script that creates a barplot showing the frequency/value of a particular item in every community of genomic features (genes of exons) that are close in the nucleus

src/find_interaction_cluster/nt_and_community.py: modifications to add the control used for each community in every figure

src/find_interaction_cluster/colocalisation_n_ppi_analysis.py: removing the duplicates in final file

src/find_interaction_cluster/colocalisation_n_ppi_analysis.py: comparison of string scores between couples of genes that are in the same community (at dna level)