Commits · 1bb5612d2f443b1cacb3887ddfb7e79d0974f74f · LBMC / ReGArDS / ChIA-PET_network · GitLab

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Jan 12, 2021
- src/nt_composition/distance.py: change in compute_controls_distances function · a9b2a119
  nfontrod authored 4 years ago
  
  a9b2a119
Jan 07, 2021
- src/nt_composition/{__main__.py, distance.py, make_nt_correlation}: add a... · d417a37c
  nfontrod authored 4 years ago
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Oct 29, 2020
- src/nt_composition/make_nt_correlation.py: add a distance parameter into... · 79bc5594
  nfontrod authored 4 years ago
  79bc5594
Oct 28, 2020
- src/nt_composition/make_nt_correlation.py: modification of... · 97b8d434
  nfontrod authored 4 years ago
  97b8d434
Aug 04, 2020
- src/nt_composition: addition of a parameter inter_chr to select only inter_chromosomal interaction · 114270b4
  nfontrod authored 4 years ago
  
  114270b4
Jul 15, 2020
- src/nt_composition/__main__.py: addition of parameter community_size to limit... · 72caf926
  nfontrod authored 4 years ago
  72caf926
- src/nt_composition/make_nt_correlation.py: major modification corresponding to... · 1db24ea1
  nfontrod authored 4 years ago
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- modification of create fiure to don't recompute figure if the result file is present · cd4eef50
  nfontrod authored 4 years ago
  
  cd4eef50
- src/nt_composition/distance.py: modification of create_all_distance_figures to... · 56c28838
  nfontrod authored 4 years ago
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- src/nt_composition/config.py: add the parameter community_size in... · 4e3f9b0f
  nfontrod authored 4 years ago
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Jul 10, 2020
- modification to use only good chia-pet projects · 721ea805
  nfontrod authored 4 years ago
  
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Jul 03, 2020
- src/nt_composition/__main__.py: modification of launcher function to either... · fc58b721
  nfontrod authored 4 years ago
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- src/nt_composition/config.py: modification of get_density_file by adding a new... · a5e99652
  nfontrod authored 4 years ago
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- src/nt_composition/distance.py: script to check whether the co-localised exons... · b4c6b30c
  nfontrod authored 4 years ago
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Jul 01, 2020
- src/nt_composition/__main__.py: add the new parameter compute_mean · df35dfe6
  nfontrod authored 4 years ago
  
  df35dfe6
- src/nt_composition/make_nt_correlation.py: creation of new functions to create... · fdc6a900
  nfontrod authored 4 years ago
  fdc6a900
Jun 26, 2020
- src/nt_composition/make_nt_correlation.py: fix get_select_addition function · edef0215
  nfontrod authored 4 years ago
  
  edef0215
Jun 25, 2020
- src/nt_composition/make_nt_correlation.py: creation of get_select_addition and... · 6f741c56
  nfontrod authored 4 years ago
  6f741c56
Jun 23, 2020
- src/nt_composition/make_nt_correlation.py: add the parameter ft_type when... · 4479c605
  nfontrod authored 4 years ago
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- src/nt_composition/config.py: Add a parameter ft_type in get_weight_folder · 906f1470
  nfontrod authored 4 years ago
  
  906f1470
Jun 19, 2020
- src/nt_composition/make_nt_correlation.py: creation of a... · 927729b7
  nfontrod authored 4 years ago
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- src/nt_composition/__main__.py: add the parameter same_gene to gets_interaction_number · 096c1457
  nfontrod authored 4 years ago
  
  096c1457
- src/nt_composition/make_nt_correlation.py: modification of... · 30eb71fa
  nfontrod authored 4 years ago
  30eb71fa
- src/nt_composition/get_projects_interaction.py: add a new parameter, same_gene... · d1232a66
  nfontrod authored 4 years ago
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Jun 18, 2020
- src/nt_composition/make_nt_correlation.py src/nt_composition/__main__.py:... · e2d22cc1
  nfontrod authored 4 years ago
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- src/nt_composition/make_nt_correlation.py src/nt_composition/__main__.py: Add... · d37a1c7d
  nfontrod authored 4 years ago
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- src/nt_composition/config.py : Creation of a get_feature function to recover... · d193ff23
  nfontrod authored 4 years ago
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Jun 17, 2020
- src/nt_composition/__main__.py: add a new parameter to launcher function · 1df9b4d5
  nfontrod authored 4 years ago
  
  1df9b4d5
- src/nt_composition/config.py: modifications of function to handle global_weight parameters · d2eccc07
  nfontrod authored 4 years ago
  
  d2eccc07
- src/nt_composition/make_nt_correlation.py: add a global weight parameters to... · 71530c2c
  nfontrod authored 4 years ago
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Jun 12, 2020
- src/nt_composition/config.py: Creation of get_interaction_file and... · 7f594d1f
  nfontrod authored 5 years ago
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- src/nt_composition/make_nt_correlation.py: takes now a weight corresponding to... · 5d18da29
  nfontrod authored 5 years ago
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- src/nt_composition/get_projects_interaction.py: takes now a weight... · e9406eee
  nfontrod authored 5 years ago
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- src/nt_composition/__main__.py: the logging_level is now disabled · f2fce7ff
  nfontrod authored 5 years ago
  
  f2fce7ff
- src/nt_composition/make_nt_correlation.py: Modification of... · 4998529f
  nfontrod authored 5 years ago
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Jun 10, 2020
- src/nt_composition/__main__.py: modification to use tje cpu variable · 70c581ec
  nfontrod authored 5 years ago
  
  70c581ec
- src/nt_composition/config.py: add cpu variable · 223dc57e
  nfontrod authored 5 years ago
  
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- src/nt_composition/make_nt_correlation.py: handles now multiprocessing · 80f66904
  nfontrod authored 5 years ago
  
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- src/nt_composition/__main__.py: launches the main parts of nt_correlation submodule · d3e90aca
  nfontrod authored 5 years ago
  
  d3e90aca
- src/nt_composition/make_nt_correlation.py: creation of a script that create... · 322c33d8
  nfontrod authored 5 years ago
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