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Commit f84037e4 authored by alapendr's avatar alapendr
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db_utils/interactions/config_interactions.py: modifications to allow to add...

db_utils/interactions/config_interactions.py: modifications to allow to add the distance between genes or exons in pairwise interactions
parent c17457e6
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...@@ -8,6 +8,7 @@ Description: Configuration variables for subfolder interactions. ...@@ -8,6 +8,7 @@ Description: Configuration variables for subfolder interactions.
""" """
from ..config import Config from ..config import Config
from pathlib import Path
class ConfigInteractions: class ConfigInteractions:
...@@ -30,3 +31,5 @@ class ConfigInteractions: ...@@ -30,3 +31,5 @@ class ConfigInteractions:
pet_vs_gene_output = chia_pet_interaction / 'intersections_gene' pet_vs_gene_output = chia_pet_interaction / 'intersections_gene'
couple_exon = chia_pet_interaction / 'couple_exon' couple_exon = chia_pet_interaction / 'couple_exon'
couple_gene = chia_pet_interaction / 'couple_gene' couple_gene = chia_pet_interaction / 'couple_gene'
results = Path(__file__).parents[3] / "results"
db_file = results / 'chia_pet_database.db'
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