From f84037e4e6ab97b6f4985abbbcfe0c0c573b029b Mon Sep 17 00:00:00 2001
From: alapendr <audrey.lapendry@ens-lyon.fr>
Date: Thu, 17 Sep 2020 14:26:23 +0200
Subject: [PATCH] db_utils/interactions/config_interactions.py: modifications
to allow to add the distance between genes or exons in pairwise interactions
---
src/db_utils/interactions/config_interactions.py | 3 +++
1 file changed, 3 insertions(+)
diff --git a/src/db_utils/interactions/config_interactions.py b/src/db_utils/interactions/config_interactions.py
index 753a9a2c..517923d9 100644
--- a/src/db_utils/interactions/config_interactions.py
+++ b/src/db_utils/interactions/config_interactions.py
@@ -8,6 +8,7 @@ Description: Configuration variables for subfolder interactions.
"""
from ..config import Config
+from pathlib import Path
class ConfigInteractions:
@@ -30,3 +31,5 @@ class ConfigInteractions:
pet_vs_gene_output = chia_pet_interaction / 'intersections_gene'
couple_exon = chia_pet_interaction / 'couple_exon'
couple_gene = chia_pet_interaction / 'couple_gene'
+ results = Path(__file__).parents[3] / "results"
+ db_file = results / 'chia_pet_database.db'
--
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