Skip to content
Snippets Groups Projects
Verified Commit 4d0a4530 authored by Laurent Modolo's avatar Laurent Modolo
Browse files

ucsc: fix typos in inputs channel

parent da83dcb8
No related branches found
No related tags found
No related merge requests found
...@@ -46,11 +46,11 @@ workflow wig_to_bedgraph { ...@@ -46,11 +46,11 @@ workflow wig_to_bedgraph {
fasta, fasta,
wig wig
) )
bigwig1_to_bedgraph1( bigwig_to_bedgraph(
wig_to_bigwig.out.bw wig_to_bigwig.out.bw
) )
emit: emit:
bg = bigwig1_to_bedgraph1.out.bg bg = bigwig_to_bedgraph.out.bg
} }
workflow wig2_to_bedgraph2 { workflow wig2_to_bedgraph2 {
...@@ -69,18 +69,18 @@ workflow wig2_to_bedgraph2 { ...@@ -69,18 +69,18 @@ workflow wig2_to_bedgraph2 {
bg = bigwig2_to_bedgraph2.out.bg bg = bigwig2_to_bedgraph2.out.bg
} }
params.bigwig1_to_bedgraph1 = "" params.bigwig_to_bedgraph = ""
params.bigwig1_to_bedgraph1_out = "" params.bigwig_to_bedgraph_out = ""
process bigwig1_to_bedgraph1 { process bigwig_to_bedgraph {
container = "${container_url}" container = "${container_url}"
label "big_mem_mono_cpus" label "big_mem_mono_cpus"
tag "${file_id}" tag "${file_id}"
if (params.bigwig1_to_bedgraph1_out != "") { if (params.bigwig_to_bedgraph_out != "") {
publishDir "results/${params.bigwig1_to_bedgraph1_out}", mode: 'copy' publishDir "results/${params.bigwig_to_bedgraph_out}", mode: 'copy'
} }
input: input:
tuple val(file_id) path(bw) tuple val(file_id), path(bw)
output: output:
tuple val(file_id), path("*.bg"), emit: bg tuple val(file_id), path("*.bg"), emit: bg
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Please register or to comment