Commits · 7da045e1511f2eb4abf5182f9520975c62fe9920 · LBMC / Hub / hic

Jun 14, 2023
- update docker registry + delete samtools index · 7da045e1
  Mia Croiset authored 1 year ago
  
  7da045e1
Jun 13, 2023
- correct subworkflow filter pcr dup · fa0b5e5e
  Mia Croiset authored 1 year ago
  
  fa0b5e5e
Jun 12, 2023
- refactorisation remove gatk module · e92a4085
  Mia Croiset authored 1 year ago
  
  e92a4085
- filter pcr dup for hicpro · 044cb4d3
  Mia Croiset authored 1 year ago
  
  044cb4d3
Jun 08, 2023
- correct path MarkDuplicates · 4f3bd901
  Mia Croiset authored 1 year ago
  
  4f3bd901
Jun 05, 2023
- subworkflows/local/hicstuff_sub.nf: remove some unused import and rename the SAMTOOLS_SORT process · 46b3c445
  nfontrod authored 1 year ago
  
  46b3c445
- subworkflows/local/hicstuff_sub.nf: update · ad343845
  nfontrod authored 1 year ago
  
  ad343845
- subworkflows/local/hicstuff_sub.nf: update · 40694c85
  nfontrod authored 1 year ago
  
  40694c85
Jun 02, 2023
- TO FIX markduplicates picard · b607dc0e
  Mia Croiset authored 1 year ago
  
  b607dc0e
Jun 01, 2023
- suppr view · 59bd5bf1
  Mia Croiset authored 1 year ago
  
  59bd5bf1
- correct path of markduplicates · 09e19d2d
  Mia Croiset authored 1 year ago
  
  09e19d2d
- TO FIX markduplicates pcr filter option · f8fcb912
  Mia Croiset authored 1 year ago
  
  f8fcb912
May 12, 2023
- hicstuff pcr filter module · 364489ed
  Mia Croiset authored 2 years ago
  
  364489ed
May 11, 2023
- hicstuff distance law option · fae56c14
  Mia Croiset authored 2 years ago
  
  fae56c14
May 04, 2023
- hicstuff filter events module · a757671e
  Mia Croiset authored 2 years ago
  
  a757671e
May 03, 2023
- Different matrix building · c4a7c592
  Mia Croiset authored 2 years ago
  
  c4a7c592
Mar 08, 2023
- CORRECTION hicstuff_sub · a340eef4
  Mia Croiset authored 2 years ago
  
  a340eef4
Feb 27, 2023
- CORRECTION module bam2pairs input bam · dcd2e93f
  Mia Croiset authored 2 years ago
  
  dcd2e93f
Feb 16, 2023
- TEST module build_matrix · f54462d4
  Mia Croiset authored 2 years ago
  
  f54462d4
Feb 15, 2023
- TEST module bam2pairs · 9f6f0ce6
  Mia Croiset authored 2 years ago
  
  9f6f0ce6
Feb 10, 2023
- TEST fragment enzyme modules · f1fe040e
  Mia Croiset authored 2 years ago
  
  f1fe040e
Feb 03, 2023
- TEST correction alignement meta chunck · 4aa3ea2e
  Mia Croiset authored 2 years ago
  
  4aa3ea2e
Jan 20, 2023
- Update subworkflows/local/cooler.nf · f720ed54
  Nicolas Servant authored 2 years ago
  f720ed54
Jan 04, 2023
- Add comments in bowtie call · f5686750
  nservant authored 2 years ago
  
  f5686750
- Update subworkflows/local/hicpro.nf · 170a492b
  Nicolas Servant authored 2 years ago
  170a492b
Dec 19, 2022
- [MODIF] update local modules · 4b0a2fe3
  nservant authored 2 years ago
  
  4b0a2fe3
- [CLEAN] · 37ed36d0
  nservant authored 2 years ago
  
  37ed36d0
- [TEST] update local modules · 05e7f6a2
  nservant authored 2 years ago
  
  05e7f6a2
- [MODULE] update cooltools · a2843225
  nservant authored 2 years ago
  
  a2843225
Jul 18, 2022
- [MODIF] test on real dataset · f3ba46f4
  nservant authored 2 years ago
  
  f3ba46f4
May 06, 2022
- [LINT] move to 4 spaces · befbf094
  nservant authored 3 years ago
  
  befbf094
- [MODIF] deal with technical replicates · 0c51b65d
  nservant authored 3 years ago
  
  0c51b65d
- update split_fastq · ea975126
  nservant authored 3 years ago
  
  ea975126
- [MODIF] deal with technical replicates · b1162124
  nservant authored 3 years ago
  
  b1162124
- fix bug in prepare genome · d8ea2398
  nservant authored 3 years ago
  
  d8ea2398
May 05, 2022
- [LINT] fix · 0f427397
  nservant authored 3 years ago
  
  0f427397
- [MODIF] update · 6347311a
  nservant authored 3 years ago
  
  6347311a
Mar 19, 2022
- [MODIF] split_fastq · 60f80c27
  nservant authored 3 years ago
  
  60f80c27
Mar 15, 2022
- Template update for nf-core/tools version 2.3 · 18f4c9c4
  nf-core-bot authored 3 years ago
  
  18f4c9c4
Feb 28, 2022
- [MODIF] update cooltools · f17ea6ff
  nservant authored 3 years ago
  
  f17ea6ff