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LBMC
Hub
hic
Commits
9b7e1961
Unverified
Commit
9b7e1961
authored
2 years ago
by
Nicolas Servant
Committed by
GitHub
2 years ago
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Update hic.nf
inline channel build as suggested by @maxulysse
parent
262c90a4
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workflows/hic.nf
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-12
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workflows/hic.nf
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9b7e1961
...
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@@ -56,12 +56,8 @@ if (params.res_tads && !params.skip_tads){
}
if (params.res_dist_decay && !params.skip_dist_decay){
Channel.from( "${params.res_dist_decay}" )
.splitCsv()
.flatten()
.toInteger()
.set {ch_ddecay_res}
ch_map_res = ch_map_res.concat(ch_ddecay_res)
ch_ddecay_res = Channel.from( "${params.res_dist_decay}" ).splitCsv().flatten().toInteger()
ch_map_res = ch_map_res.concat(ch_ddecay_res)
}else{
ch_ddecay_res = Channel.empty()
if (!params.skip_dist_decay){
...
...
@@ -70,12 +66,8 @@ if (params.res_dist_decay && !params.skip_dist_decay){
}
if (params.res_compartments && !params.skip_compartments){
Channel.from( "${params.res_compartments}" )
.splitCsv()
.flatten()
.toInteger()
.set {ch_comp_res}
ch_map_res = ch_map_res.concat(ch_comp_res)
ch_comp_res = Channel.from( "${params.res_compartments}" ).splitCsv().flatten().toInteger()
ch_map_res = ch_map_res.concat(ch_comp_res)
}else{
ch_comp_res = Channel.empty()
if (!params.skip_compartments){
...
...
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