diff --git a/workflows/hic.nf b/workflows/hic.nf index 834afc070c6dee1efda605f47766d0e2078acff7..faa6a59cdcf19d5b5976257bd8f52c572374c9c1 100644 --- a/workflows/hic.nf +++ b/workflows/hic.nf @@ -56,12 +56,8 @@ if (params.res_tads && !params.skip_tads){ } if (params.res_dist_decay && !params.skip_dist_decay){ - Channel.from( "${params.res_dist_decay}" ) - .splitCsv() - .flatten() - .toInteger() - .set {ch_ddecay_res} - ch_map_res = ch_map_res.concat(ch_ddecay_res) + ch_ddecay_res = Channel.from( "${params.res_dist_decay}" ).splitCsv().flatten().toInteger() + ch_map_res = ch_map_res.concat(ch_ddecay_res) }else{ ch_ddecay_res = Channel.empty() if (!params.skip_dist_decay){ @@ -70,12 +66,8 @@ if (params.res_dist_decay && !params.skip_dist_decay){ } if (params.res_compartments && !params.skip_compartments){ - Channel.from( "${params.res_compartments}" ) - .splitCsv() - .flatten() - .toInteger() - .set {ch_comp_res} - ch_map_res = ch_map_res.concat(ch_comp_res) + ch_comp_res = Channel.from( "${params.res_compartments}" ).splitCsv().flatten().toInteger() + ch_map_res = ch_map_res.concat(ch_comp_res) }else{ ch_comp_res = Channel.empty() if (!params.skip_compartments){