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Verified Commit 97e9f94c authored by Laurent Modolo's avatar Laurent Modolo
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change default option for hicstuff bowtie2 mapping end to end

parent 2d684ede
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......@@ -138,7 +138,7 @@ params {
max_time = '240.h'
// Hicstuff
hicstuff_bwt2_align_opts = '--very-sensitive-local'
hicstuff_bwt2_align_opts = '--very-sensitive'
hicstuff_min_size = 0
hicstuff_circular = 'false'
hicstuff_output_contigs = 'info_contigs.txt'
......
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