diff --git a/nextflow.config b/nextflow.config index bca7a2b5687d14ef646d1fc0630f9773449215b4..d8fc7542707f2d6443adffabccbc8cd1cef02254 100644 --- a/nextflow.config +++ b/nextflow.config @@ -138,7 +138,7 @@ params { max_time = '240.h' // Hicstuff - hicstuff_bwt2_align_opts = '--very-sensitive-local' + hicstuff_bwt2_align_opts = '--very-sensitive' hicstuff_min_size = 0 hicstuff_circular = 'false' hicstuff_output_contigs = 'info_contigs.txt'