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Unverified Commit 7402e45d authored by Nicolas Servant's avatar Nicolas Servant Committed by GitHub
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Update .github/workflows/awsfulltest.yml 


Co-authored-by: default avatarHarshil Patel <drpatelh@users.noreply.github.com>
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.github/workflows/awsfulltest.yml
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......@@ -36,4 +36,4 @@ jobs:
--job-name nf-core-hic \
--job-queue $AWS_JOB_QUEUE \
--job-definition $AWS_JOB_DEFINITION \
--container-overrides '{"command": ["nf-core/hic", "-r '"${GITHUB_SHA}"' -profile test --outdir s3://'"${AWS_S3_BUCKET}"'/hic/results-'"${GITHUB_SHA}"' -w s3://'"${AWS_S3_BUCKET}"'/hic/work-'"${GITHUB_SHA}"' -with-tower"], "environment": [{"name": "TOWER_ACCESS_TOKEN", "value": "'"$TOWER_ACCESS_TOKEN"'"}]}'
--container-overrides '{"command": ["nf-core/hic", "-r '"${GITHUB_SHA}"' -profile test_full --outdir s3://'"${AWS_S3_BUCKET}"'/hic/results-'"${GITHUB_SHA}"' -w s3://'"${AWS_S3_BUCKET}"'/hic/work-'"${GITHUB_SHA}"' -with-tower"], "environment": [{"name": "TOWER_ACCESS_TOKEN", "value": "'"$TOWER_ACCESS_TOKEN"'"}]}'
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