From 7402e45d7317b1f762b12d87304851c3acee538b Mon Sep 17 00:00:00 2001
From: Nicolas Servant <nicolas.servant@curie.fr>
Date: Wed, 2 Sep 2020 17:56:34 +0200
Subject: [PATCH] Update .github/workflows/awsfulltest.yml
Co-authored-by: Harshil Patel <drpatelh@users.noreply.github.com>
---
.github/workflows/awsfulltest.yml | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/.github/workflows/awsfulltest.yml b/.github/workflows/awsfulltest.yml
index a432531..8344dc5 100644
--- a/.github/workflows/awsfulltest.yml
+++ b/.github/workflows/awsfulltest.yml
@@ -36,4 +36,4 @@ jobs:
--job-name nf-core-hic \
--job-queue $AWS_JOB_QUEUE \
--job-definition $AWS_JOB_DEFINITION \
- --container-overrides '{"command": ["nf-core/hic", "-r '"${GITHUB_SHA}"' -profile test --outdir s3://'"${AWS_S3_BUCKET}"'/hic/results-'"${GITHUB_SHA}"' -w s3://'"${AWS_S3_BUCKET}"'/hic/work-'"${GITHUB_SHA}"' -with-tower"], "environment": [{"name": "TOWER_ACCESS_TOKEN", "value": "'"$TOWER_ACCESS_TOKEN"'"}]}'
+ --container-overrides '{"command": ["nf-core/hic", "-r '"${GITHUB_SHA}"' -profile test_full --outdir s3://'"${AWS_S3_BUCKET}"'/hic/results-'"${GITHUB_SHA}"' -w s3://'"${AWS_S3_BUCKET}"'/hic/work-'"${GITHUB_SHA}"' -with-tower"], "environment": [{"name": "TOWER_ACCESS_TOKEN", "value": "'"$TOWER_ACCESS_TOKEN"'"}]}'
--
GitLab