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Commit 5f8dff52 authored by Adam Talbot's avatar Adam Talbot
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ubuntu:20.04 to nf-core version

parent 01d51d57
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......@@ -5,7 +5,7 @@ process BUILD_CONTACT_MAPS{
conda "conda-forge::sed=4.7"
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/ubuntu:20.04' :
'nfcore/ubuntu:20.04' }"
'quay.io/nf-core/ubuntu:20.04' }"
input:
tuple val(meta), path(vpairs), val(resolution)
......
......@@ -5,7 +5,7 @@ process MERGE_VALID_INTERACTION {
conda "conda-forge::gawk=5.1.0"
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/ubuntu:20.04' :
'nfcore/ubuntu:20.04' }"
'quay.io/nf-core/ubuntu:20.04' }"
input:
tuple val(meta), path(vpairs)
......
......@@ -5,7 +5,7 @@ process TRIM_READS {
conda "conda-forge::sed=4.7"
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/ubuntu:20.04' :
'nfcore/ubuntu:20.04' }"
'quay.io/nf-core/ubuntu:20.04' }"
input:
tuple val(meta), path(reads)
......
......@@ -5,7 +5,7 @@ process SPLIT_COOLER_DUMP {
conda "conda-forge::gawk=5.1.0"
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/ubuntu:20.04' :
'nfcore/ubuntu:20.04' }"
'quay.io/nf-core/ubuntu:20.04' }"
input:
tuple val(meta), path(bedpe)
......
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