diff --git a/modules/local/hicpro/build_contact_maps.nf b/modules/local/hicpro/build_contact_maps.nf index c4e46169f5c3f518a43676b7980bc2ca867196f4..34b27aab498c8e1c45355d01b991d5900a619f33 100644 --- a/modules/local/hicpro/build_contact_maps.nf +++ b/modules/local/hicpro/build_contact_maps.nf @@ -5,7 +5,7 @@ process BUILD_CONTACT_MAPS{ conda "conda-forge::sed=4.7" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/ubuntu:20.04' : - 'nfcore/ubuntu:20.04' }" + 'quay.io/nf-core/ubuntu:20.04' }" input: tuple val(meta), path(vpairs), val(resolution) diff --git a/modules/local/hicpro/merge_valid_interaction.nf b/modules/local/hicpro/merge_valid_interaction.nf index 6a5c830bb58dfadeab551af1c46aef433bbfeff1..25c437ef795882591b0f50fcf4a235f29dc60822 100644 --- a/modules/local/hicpro/merge_valid_interaction.nf +++ b/modules/local/hicpro/merge_valid_interaction.nf @@ -5,7 +5,7 @@ process MERGE_VALID_INTERACTION { conda "conda-forge::gawk=5.1.0" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/ubuntu:20.04' : - 'nfcore/ubuntu:20.04' }" + 'quay.io/nf-core/ubuntu:20.04' }" input: tuple val(meta), path(vpairs) diff --git a/modules/local/hicpro/trim_reads.nf b/modules/local/hicpro/trim_reads.nf index f6d2e90cdd1f82c13a5ee54b87d8b0456e42469f..b9f2ea47e8f2ac40ae3a8ec17f6e01d0e22401b3 100644 --- a/modules/local/hicpro/trim_reads.nf +++ b/modules/local/hicpro/trim_reads.nf @@ -5,7 +5,7 @@ process TRIM_READS { conda "conda-forge::sed=4.7" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/ubuntu:20.04' : - 'nfcore/ubuntu:20.04' }" + 'quay.io/nf-core/ubuntu:20.04' }" input: tuple val(meta), path(reads) diff --git a/modules/local/split_cooler_dump.nf b/modules/local/split_cooler_dump.nf index c9dde0086009d46c9d04a5342f3197a9d211653e..5e392c140a86e51925b1ce751a81868dda5268ef 100644 --- a/modules/local/split_cooler_dump.nf +++ b/modules/local/split_cooler_dump.nf @@ -5,7 +5,7 @@ process SPLIT_COOLER_DUMP { conda "conda-forge::gawk=5.1.0" container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ? 'https://depot.galaxyproject.org/singularity/ubuntu:20.04' : - 'nfcore/ubuntu:20.04' }" + 'quay.io/nf-core/ubuntu:20.04' }" input: tuple val(meta), path(bedpe)