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Verified Commit 082db14b authored by Mia Croiset's avatar Mia Croiset
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docs add skip_plot_matrix flag

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......@@ -234,6 +234,14 @@ Binsize for plotting matrix. Default: 10000
--hicstuff_bin [binsize]
```
### `--skip_plot_matrix`
Do not plot matrices. Default: false
```bash
--skip_plot_matrix
```
> :warning: **Warning**: Depending of the size of your input, the bin size may not correspond and make the pipeline fail
>>10000 is default for human genome.
>>For yeast for example you may want to use a smaller bin
......
......@@ -640,6 +640,14 @@ Do not call TADs. Default: false
--skip_tads
```
### `--skip_plot_matrix`
Do not plot matrices. Default: false
```bash
--skip_plot_matrix
```
### `--skip_multiQC`
If defined, the MultiQC report is not generated. Default: false
......
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