update path in sample.csv to fastq instead of fastq.gz

data/sample_mbelari.csv

-female1: data/Mbelari_females/1_S1_L001_R1_001.fastq.gz ; data/Mbelari_females/1_S1_L001_R2_001.fastq.gz
-female2: data/Mbelari_females/2_S2_L001_R1_001.fastq.gz ; data/Mbelari_females/2_S2_L001_R2_001.fastq.gz
-female3: data/Mbelari_females/3_S3_L001_R1_001.fastq.gz ; data/Mbelari_females/3_S3_L001_R2_001.fastq.gz
-female4: data/Mbelari_females/4_S4_L001_R1_001.fastq.gz ; data/Mbelari_females/4_S4_L001_R2_001.fastq.gz
-female5: data/Mbelari_females/5_S5_L001_R1_001.fastq.gz ; data/Mbelari_females/5_S5_L001_R2_001.fastq.gz
-female6: data/Mbelari_females/6_S6_L001_R1_001.fastq.gz ; data/Mbelari_females/6_S6_L001_R2_001.fastq.gz
-female7: data/Mbelari_females/MRDR5_R1.fastq.gz ; data/Mbelari_females/MRDR5_R2.fastq.gz
-male1: /data/Mbelari_males/JU2817_males_S11_L002_R1_001.fastq.gz ; /data/Mbelari_males/JU2817_males_S11_L002_R2_001.fastq.gz
-male2: /data/Mbelari_males/MRDR6_R1.fastq.gz ; /data/Mbelari_males/MRDR6_R2.fastq.gz
+female1: data/Mbelari_females/1_S1_L001_R1_001.fastq ; data/Mbelari_females/1_S1_L001_R2_001.fastq
+female2: data/Mbelari_females/2_S2_L001_R1_001.fastq ; data/Mbelari_females/2_S2_L001_R2_001.fastq
+female3: data/Mbelari_females/3_S3_L001_R1_001.fastq ; data/Mbelari_females/3_S3_L001_R2_001.fastq
+female4: data/Mbelari_females/4_S4_L001_R1_001.fastq ; data/Mbelari_females/4_S4_L001_R2_001.fastq
+female5: data/Mbelari_females/5_S5_L001_R1_001.fastq ; data/Mbelari_females/5_S5_L001_R2_001.fastq
+female6: data/Mbelari_females/6_S6_L001_R1_001.fastq ; data/Mbelari_females/6_S6_L001_R2_001.fastq
+female7: data/Mbelari_females/MRDR5_R1.fastq ; data/Mbelari_females/MRDR5_R2.fastq
+male1: /data/Mbelari_males/JU2817_males_S11_L002_R1_001.fastq ; /data/Mbelari_males/JU2817_males_S11_L002_R2_001.fastq
+male2: /data/Mbelari_males/MRDR6_R1.fastq ; /data/Mbelari_males/MRDR6_R2.fastq

data/sample_mlongespiculosa.csv

-female1: data/Mlongespiculosa_females/MRDR3_R1.fastq.gz ; data/Mlongespiculosa_females/MRDR3_R2.fastq.gz
-male1: /data/Mlongespiculosa_males/MRDR4_R1.fastq.gz ; /data/Mlongespiculosa_males/MRDR4_R1.fastq.gz
+female1: data/Mlongespiculosa_females/MRDR3_R1.fastq ; data/Mlongespiculosa_females/MRDR3_R2.fastq
+male1: /data/Mlongespiculosa_males/MRDR4_R1.fastq ; /data/Mlongespiculosa_males/MRDR4_R1.fastq

data/sample_mspiculigera.csv

-female1: data/Mspiculigera_females/AF72-females_BIS_S8_L002_R1_001.fastq.gz ; data/Mspiculigera_females/AF72-females_BIS_S8_L002_R2_001.fastq.gz
-male1: /data/Mspiculigera_males/AF72-males_S7_L002_R1_001.fastq.gz ; /data/Mspiculigera_males/AF72-males_S7_L002_R2_001.fastq.gz
+female1: data/Mspiculigera_females/AF72-females_BIS_S8_L002_R1_001.fastq ; data/Mspiculigera_females/AF72-females_BIS_S8_L002_R2_001.fastq
+male1: /data/Mspiculigera_males/AF72-males_S7_L002_R1_001.fastq ; /data/Mspiculigera_males/AF72-males_S7_L002_R2_001.fastq