diff --git a/data/sample_mbelari.csv b/data/sample_mbelari.csv
index 2894ac768669c2da9155d62c080126139cc07ba0..9cda10d8bd6b10138c992462566ba4983fb97ec5 100644
--- a/data/sample_mbelari.csv
+++ b/data/sample_mbelari.csv
@@ -1,9 +1,9 @@
-female1: data/Mbelari_females/1_S1_L001_R1_001.fastq.gz ; data/Mbelari_females/1_S1_L001_R2_001.fastq.gz
-female2: data/Mbelari_females/2_S2_L001_R1_001.fastq.gz ; data/Mbelari_females/2_S2_L001_R2_001.fastq.gz
-female3: data/Mbelari_females/3_S3_L001_R1_001.fastq.gz ; data/Mbelari_females/3_S3_L001_R2_001.fastq.gz
-female4: data/Mbelari_females/4_S4_L001_R1_001.fastq.gz ; data/Mbelari_females/4_S4_L001_R2_001.fastq.gz
-female5: data/Mbelari_females/5_S5_L001_R1_001.fastq.gz ; data/Mbelari_females/5_S5_L001_R2_001.fastq.gz
-female6: data/Mbelari_females/6_S6_L001_R1_001.fastq.gz ; data/Mbelari_females/6_S6_L001_R2_001.fastq.gz
-female7: data/Mbelari_females/MRDR5_R1.fastq.gz ; data/Mbelari_females/MRDR5_R2.fastq.gz
-male1: /data/Mbelari_males/JU2817_males_S11_L002_R1_001.fastq.gz ; /data/Mbelari_males/JU2817_males_S11_L002_R2_001.fastq.gz
-male2: /data/Mbelari_males/MRDR6_R1.fastq.gz ; /data/Mbelari_males/MRDR6_R2.fastq.gz
+female1: data/Mbelari_females/1_S1_L001_R1_001.fastq ; data/Mbelari_females/1_S1_L001_R2_001.fastq
+female2: data/Mbelari_females/2_S2_L001_R1_001.fastq ; data/Mbelari_females/2_S2_L001_R2_001.fastq
+female3: data/Mbelari_females/3_S3_L001_R1_001.fastq ; data/Mbelari_females/3_S3_L001_R2_001.fastq
+female4: data/Mbelari_females/4_S4_L001_R1_001.fastq ; data/Mbelari_females/4_S4_L001_R2_001.fastq
+female5: data/Mbelari_females/5_S5_L001_R1_001.fastq ; data/Mbelari_females/5_S5_L001_R2_001.fastq
+female6: data/Mbelari_females/6_S6_L001_R1_001.fastq ; data/Mbelari_females/6_S6_L001_R2_001.fastq
+female7: data/Mbelari_females/MRDR5_R1.fastq ; data/Mbelari_females/MRDR5_R2.fastq
+male1: /data/Mbelari_males/JU2817_males_S11_L002_R1_001.fastq ; /data/Mbelari_males/JU2817_males_S11_L002_R2_001.fastq
+male2: /data/Mbelari_males/MRDR6_R1.fastq ; /data/Mbelari_males/MRDR6_R2.fastq
diff --git a/data/sample_mlongespiculosa.csv b/data/sample_mlongespiculosa.csv
index 6fc58bf5fbf770f89b9b1590957b8e8f33c13cb6..f8cc76a91eab1466fe5da6769d9a518721b44d8b 100644
--- a/data/sample_mlongespiculosa.csv
+++ b/data/sample_mlongespiculosa.csv
@@ -1,2 +1,2 @@
-female1: data/Mlongespiculosa_females/MRDR3_R1.fastq.gz ; data/Mlongespiculosa_females/MRDR3_R2.fastq.gz
-male1: /data/Mlongespiculosa_males/MRDR4_R1.fastq.gz ; /data/Mlongespiculosa_males/MRDR4_R1.fastq.gz
+female1: data/Mlongespiculosa_females/MRDR3_R1.fastq ; data/Mlongespiculosa_females/MRDR3_R2.fastq
+male1: /data/Mlongespiculosa_males/MRDR4_R1.fastq ; /data/Mlongespiculosa_males/MRDR4_R1.fastq
diff --git a/data/sample_mspiculigera.csv b/data/sample_mspiculigera.csv
index 3ca9155b507d1db8c8c23b795c0bdfc383610a78..56a38f8697d1d0f1321b19709a322cbbaad4a885 100644
--- a/data/sample_mspiculigera.csv
+++ b/data/sample_mspiculigera.csv
@@ -1,2 +1,2 @@
-female1: data/Mspiculigera_females/AF72-females_BIS_S8_L002_R1_001.fastq.gz ; data/Mspiculigera_females/AF72-females_BIS_S8_L002_R2_001.fastq.gz
-male1: /data/Mspiculigera_males/AF72-males_S7_L002_R1_001.fastq.gz ; /data/Mspiculigera_males/AF72-males_S7_L002_R2_001.fastq.gz
+female1: data/Mspiculigera_females/AF72-females_BIS_S8_L002_R1_001.fastq ; data/Mspiculigera_females/AF72-females_BIS_S8_L002_R2_001.fastq
+male1: /data/Mspiculigera_males/AF72-males_S7_L002_R1_001.fastq ; /data/Mspiculigera_males/AF72-males_S7_L002_R2_001.fastq