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Verified Commit 76d3ebe5 authored by Laurent Modolo's avatar Laurent Modolo
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slurm: add abs path to ch-run

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src/mbelari_count.slurm
+ 1
− 1
View file @ 76d3ebe5
......@@ -10,7 +10,7 @@
cd /scratch/Bio/lmodolo/kmer_diff/
alias kmdiff="ch-run -b /scratch /Xnfs/abc/charliecloud/img/lbmc%kmdiff+1.0.1 -- kmdiff"
alias kmdiff="/Xnfs/abc/charliecloud_bin/ch-run -b /scratch /Xnfs/abc/charliecloud/img/lbmc%kmdiff+1.0.1 -- kmdiff"
WORK=$(pwd)
# kmdiff count
......
src/mlongespiculosa_count.slurm
+ 1
− 1
View file @ 76d3ebe5
......@@ -10,7 +10,7 @@
cd /scratch/Bio/lmodolo/kmer_diff/
alias kmdiff="ch-run -b /scratch /Xnfs/abc/charliecloud/img/lbmc%kmdiff+1.0.1 -- kmdiff"
alias kmdiff="/Xnfs/abc/charliecloud_bin/ch-run -b /scratch /Xnfs/abc/charliecloud/img/lbmc%kmdiff+1.0.1 -- kmdiff"
WORK=$(pwd)
# kmdiff count
......
src/mspiculigera_count.slurm
+ 1
− 1
View file @ 76d3ebe5
......@@ -11,7 +11,7 @@
cd /scratch/Bio/lmodolo/kmer_diff/
alias kmdiff="ch-run -b /scratch /Xnfs/abc/charliecloud/img/lbmc%kmdiff+1.0.1 -- kmdiff"
alias kmdiff="/Xnfs/abc/charliecloud_bin/ch-run -b /scratch /Xnfs/abc/charliecloud/img/lbmc%kmdiff+1.0.1 -- kmdiff"
WORK=$(pwd)
# kmdiff count
......
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