gffread: add -x option

b9a27794 · Laurent Modolo · 3dd05762 · b9a27794
Verified Commit b9a27794 authored 3 years ago by Laurent Modolo
--- a/src/nf_modules/gffread/main.nf
+++ b/src/nf_modules/gffread/main.nf
@@ -25,6 +25,6 @@ process gffread {
    file_prefix = file_id
  }
  """
-  gffread ${gtf} -g ${fasta} -o ${file_prefix}.fasta
+  gffread ${gtf} -g ${fasta} -x -o ${file_prefix}.fasta
  """
 }
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