update docker script for v0.4.0 to automatise push

src/.docker_modules/bcftools/1.7/docker_init.sh

 #!/bin/sh
+docker pull lbmc/bcftools:1.7
 docker build src/.docker_modules/bcftools/1.7 -t 'lbmc/bcftools:1.7'
 docker push lbmc/bcftools:1.7

src/.docker_modules/bedtools/2.25.0/docker_init.sh

 #!/bin/sh
+docker pull lbmc/bedtools:2.25.0
 docker build src/.docker_modules/bedtools/2.25.0 -t 'lbmc/bedtools:2.25.0'
 docker push lbmc/bedtools:2.25.0

src/.docker_modules/bioawk/1.0/docker_init.sh

 #!/bin/sh
+docker pull lbmc/bioawk:1.0
 docker build src/.docker_modules/bioawk/1.0 -t 'lbmc/bioawk:1.0'
 docker push lbmc/bioawk:1.0

src/.docker_modules/bowtie/1.2.2/docker_init.sh

 #!/bin/sh
+docker pull lbmc/bowtie:1.2.2
 docker build src/.docker_modules/bowtie/1.2.2 -t 'lbmc/bowtie:1.2.2'
 docker push lbmc/bowtie:1.2.2

src/.docker_modules/bowtie2/2.3.4.1/docker_init.sh

 #!/bin/sh
+docker pull lbmc/bowtie2:2.3.4.1
 docker build src/.docker_modules/bowtie2/2.3.4.1 -t 'lbmc/bowtie2:2.3.4.1'
 docker push lbmc/bowtie2:2.3.4.1

src/.docker_modules/bwa/0.7.17/Dockerfile

-FROM sambamba:0.6.7
+FROM lbmc/sambamba:0.6.7
 MAINTAINER Laurent Modolo
 
 ENV BWA_VERSION=0.7.17
 ENV SAMBLASTER_VERSION=0.1.24
 
-ENV PACKAGES curl=7.58.0* \
+ENV PACKAGES curl=7.58* \
     ca-certificates=20180409 \
     build-essential=12.4* \
     zlib1g-dev=1:1.2.11*

src/.docker_modules/bwa/0.7.17/docker_init.sh

 #!/bin/sh
+docker pull lbmc/bwa:0.7.17
 docker build src/.docker_modules/bwa/0.7.17 -t 'lbmc/bwa:0.7.17'
 docker push lbmc/bwa:0.7.17

src/.docker_modules/canu/1.6/docker_init.sh

 #!/bin/sh
+docker pull lbmc/canu:1.6
 docker build src/.docker_modules/canu/1.6 -t 'lbmc/canu:1.6'
 docker push lbmc/canu:1.6

src/.docker_modules/cutadapt/1.14/docker_init.sh

 #!/bin/sh
+docker pull lbmc/cutadapt:1.14
 docker build src/.docker_modules/cutadapt/1.14 -t 'lbmc/cutadapt:1.14'
 docker push lbmc/cutadapt:1.14

src/.docker_modules/cutadapt/1.15/docker_init.sh

 #!/bin/sh
+docker pull lbmc/cutadapt:1.15
 docker build src/.docker_modules/cutadapt/1.15 -t 'lbmc/cutadapt:1.15'
 docker push lbmc/cutadapt:1.15

src/.docker_modules/cutadapt/2.1/docker_init.sh

 #!/bin/sh
+docker pull lbmc/cutadapt:2.1
 docker build src/.docker_modules/cutadapt/2.1 -t 'lbmc/cutadapt:2.1'
 docker push lbmc/cutadapt:2.1

src/.docker_modules/deeptools/3.0.2/docker_init.sh

 #!/bin/sh
+docker pull lbmc/deeptools:3.0.2
 docker build src/.docker_modules/deeptools/3.0.2 -t 'lbmc/deeptools:3.0.2'
 docker push lbmc/deeptools:3.0.2

src/.docker_modules/deeptools/3.1.1/docker_init.sh

 #!/bin/sh
+docker pull lbmc/deeptools:3.1.1
 docker build src/.docker_modules/deeptools/3.1.1 -t 'lbmc/deeptools:3.1.1'
 docker push lbmc/deeptools:3.1.1

src/.docker_modules/fastp/0.19.7/docker_init.sh

 #!/bin/sh
+docker pull lbmc/fastp:0.19.7
 docker build src/.docker_modules/fastp/0.19.7 -t 'lbmc/fastp:0.19.7'
 docker push lbmc/fastp:0.19.7

src/.docker_modules/fastqc/0.11.5/docker_init.sh

 #!/bin/sh
+docker pull lbmc/fastqc:0.11.5
 docker build src/.docker_modules/fastqc/0.11.5 -t 'lbmc/fastqc:0.11.5'
 docker push lbmc/fastqc:0.11.5

src/.docker_modules/file_handle/0.1.1/docker_init.sh

 #!/bin/sh
+docker pull lbmc/file_handle:0.1.1
 docker build src/.docker_modules/file_handle/0.1.1 -t 'lbmc/file_handle:0.1.1'
 docker push lbmc/file_handle:0.1.1

src/.docker_modules/gatk/4.0.8.1/docker_init.sh

 #!/bin/sh
+docker pull lbmc/gatk:4.0.8.1
 docker build src/.docker_modules/gatk/4.0.8.1 -t 'lbmc/gatk:4.0.8.1'
 docker push lbmc/gatk:4.0.8.1

src/.docker_modules/hisat2/2.0.0/docker_init.sh

 #!/bin/sh
+docker pull lbmc/hisat2:2.0.0
 docker build src/.docker_modules/hisat2/2.0.0 -t 'lbmc/hisat2:2.0.0'
 docker push lbmc/hisat2:2.0.0

src/.docker_modules/hisat2/2.1.0/docker_init.sh

 #!/bin/sh
+docker pull lbmc/hisat2:2.1.0
 docker build src/.docker_modules/hisat2/2.1.0 -t 'lbmc/hisat2:2.1.0'
 docker push lbmc/hisat2:2.1.0

src/.docker_modules/htseq/0.11.2/docker_init.sh

 #!/bin/sh
+docker pull lbmc/htseq:0.11.2
 docker build src/.docker_modules/htseq/0.11.2 -t 'lbmc/htseq:0.11.2'
 docker push lbmc/htseq:0.11.2