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Verified Commit 364632ef authored by Laurent Modolo's avatar Laurent Modolo
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Docker: add minimap2:2.17

parent 9c64bd7b
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FROM quay.io/biocontainers/samtools:0.1.18--hfb9b9cc_10 AS samtools
# /usr/local/bin/samtools
# / # ldd /usr/local/bin/samtools
# /lib64/ld-linux-x86-64.so.2 (0x7efddcdcc000)
# libncurses.so.6 => /usr/local/bin/../lib/libncurses.so.6 (0x7efddcfad000)
# libtinfo.so.6 => /usr/local/bin/../lib/libtinfo.so.6 (0x7efddcf6f000)
# libm.so.6 => /lib64/ld-linux-x86-64.so.2 (0x7efddcdcc000)
# libz.so.1 => /usr/local/bin/../lib/libz.so.1 (0x7efddcf55000)
# libc.so.6 => /lib64/ld-linux-x86-64.so.2 (0x7efddcdcc000)
FROM quay.io/biocontainers/minimap2:2.17--hed695b0_3
MAINTAINER Laurent Modolo
ENV MINIMAP2_VERSION=2.17
COPY --from=samtools /usr/local/bin/samtools /usr/local/bin/
COPY --from=samtools /usr/local//lib/libncurses.so.6 /usr/local/lib/
COPY --from=samtools /usr/local//lib/libtinfo.so.6 /usr/local/lib/
# /usr/local/bin/minimap2
# / # ldd /usr/local/bin/minimap2
# /lib64/ld-linux-x86-64.so.2 (0x7fe14f5a8000)
# libm.so.6 => /lib64/ld-linux-x86-64.so.2 (0x7fe14f5a8000)
# libz.so.1 => /usr/local/bin/../lib/libz.so.1 (0x7fe14f7c4000)
# libpthread.so.0 => /lib64/ld-linux-x86-64.so.2 (0x7fe14f5a8000)
# libc.so.6 => /lib64/ld-linux-x86-64.so.2 (0x7fe14f5a8000)
\ No newline at end of file
#!/bin/sh
docker pull lbmc/minimap2:2.17
docker build src/.docker_modules/minimap2/2.17 -t 'lbmc/minimap2:2.17'
docker push lbmc/minimap2:2.17
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