writing bowtie2 report

src/RNAseq_sen1D.nf

@@ -57,6 +57,8 @@ process random_bases_4_trimming {
   ${reads[0]} ${reads[1]} > ${pair_id}_report.txt
   """
 }
+
+
 /*
 * urqt :
 * Imputs : fastq files
@@ -142,6 +144,7 @@ process mapping_fastq {
 
   output:
   set pair_id, "*.bam" into bam_files
+  file "*_bowtie2_report.txt" into mapping_fastq_report
 
   script:
 """