Commits · 8e82fe730bc10ae122c8cefe08b4481e2674b1df · nfontrod / nextflow · GitLab

Snippets Groups Projects

Mar 04, 2019
- picard: add singularity files · 8e82fe73
  Laurent Modolo authored 6 years ago
  
  8e82fe73
- samtools: add singularity files · 4a1b22a8
  Laurent Modolo authored 6 years ago
  
  4a1b22a8
- multiqc: add singularity files · dffc6644
  Laurent Modolo authored 6 years ago
  
  dffc6644
- kallisto: add singularity files · 2c69d031
  Laurent Modolo authored 6 years ago
  
  2c69d031
- htseq: add singularity files · ceabe427
  Laurent Modolo authored 6 years ago
  
  ceabe427
- hisat2: add singularity files · e8fe1028
  Laurent Modolo authored 6 years ago
  
  e8fe1028
- gatk: add singularity files · 7a4d983c
  Laurent Modolo authored 6 years ago
  
  7a4d983c
- deeptools: add singularity files · 9fe7ac40
  Laurent Modolo authored 6 years ago
  
  9fe7ac40
- file_handle: add singularity files · 220f0ecf
  Laurent Modolo authored 6 years ago
  
  220f0ecf
- cutadapt: add singularity files · 870693e5
  Laurent Modolo authored 6 years ago
  
  870693e5
- canu: add singularity files · adcfbaad
  Laurent Modolo authored 6 years ago
  
  adcfbaad
- bioawk: add singularity files · 259e4d5b
  Laurent Modolo authored 6 years ago
  
  259e4d5b
- bcftools: add singularity files · 9329a13d
  Laurent Modolo authored 6 years ago
  
  9329a13d
- fastqc: add singularity to nf files · c55f3be5
  Laurent Modolo authored 6 years ago
  
  c55f3be5
- update link for all modules names to lowercase · 9b037d38
  Laurent Modolo authored 6 years ago
  
  9b037d38
- rename module to lowercase · 231fd9e6
  Laurent Modolo authored 6 years ago
  
  231fd9e6
- fastqc: add singularity files · f0c49b7f
  Laurent Modolo authored 6 years ago
  
  f0c49b7f
Mar 01, 2019
- Bowtie2: add singularity to nf files · cbd23ab6
  Laurent Modolo authored 6 years ago
  
  cbd23ab6
- Bowtie: add singularity to nf files · 11a52fbc
  Laurent Modolo authored 6 years ago
  
  11a52fbc
- Bowtie: add singularity files and add signature for singularity build · 3075c9c2
  Laurent Modolo authored 6 years ago
  
  3075c9c2
- BWA: add singularity def · 1f430b33
  Laurent Modolo authored 6 years ago
  
  1f430b33
- BWA: add singularity to nf files · a494361b
  Laurent Modolo authored 6 years ago
  
  a494361b
- bedtools: update singularity path · edd04712
  Laurent Modolo authored 6 years ago
  
  edd04712
- UrQt: update singularity path · 1bba0da1
  Laurent Modolo authored 6 years ago
  
  1bba0da1
- sambamba: fix singularity path · 3dc1c869
  Laurent Modolo authored 6 years ago
  
  3dc1c869
- sambamba: add singularity files · 18e9f912
  Laurent Modolo authored 6 years ago
  
  18e9f912
- BEDtools: add singularity to nf files · f1a4275c
  Laurent Modolo authored 6 years ago
  
  f1a4275c
- BEDtools: add singularity files · 5991008e
  Laurent Modolo authored 6 years ago
  
  5991008e
- UrQt: add singularity tests · 9fb75825
  Laurent Modolo authored 6 years ago
  
  9fb75825
- UrQt: switch cpus config from .nf to .config · c8902c46
  Laurent Modolo authored 6 years ago
  
  c8902c46
- UrQt: add singularity config and test · 2901dd9f
  Laurent Modolo authored 6 years ago
  
  2901dd9f
- UrQt: add singularity files · b51f888d
  Laurent Modolo authored 6 years ago
  
  b51f888d
- add bin folder to the project · 73c00f12
  Laurent Modolo authored 6 years ago
  
  73c00f12
Feb 20, 2019
- cudatapt: add cutadapt v1.15 for docker and nf · 93f2be99
  Laurent Modolo authored 6 years ago
  
  93f2be99
Feb 15, 2019
- Merge branch 'master' of gitlab_lbmc:pipelines/nextflow · 110a92e1
  Laurent Modolo authored 6 years ago
  
  110a92e1
- TP_experimental_biologists.md : fix for PSMN computers · d854d051
  Laurent Modolo authored 6 years ago
  
  d854d051
- Merge branch 'master' of gitlab_lbmc:pipelines/nextflow · ea8eaa49
  Laurent Modolo authored 6 years ago
  
  ea8eaa49
- TP_experimental_biologists.md: add fix for docker · 3a337a8f
  Laurent Modolo authored 6 years ago
  
  3a337a8f
- UrQt: Dockerfile add version · 7d4588a7
  Laurent Modolo authored 6 years ago
  
  7d4588a7
Feb 10, 2019
- MultiQC: fix Dockerfile for debian · 8bc50851
  Laurent Modolo authored 6 years ago
  
  8bc50851