Commits · 259e4d5b7bbfa0cd9cbc99827cf725b8918948a1 · nfontrod / nextflow · GitLab

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Mar 04, 2019
- bioawk: add singularity files · 259e4d5b
  Laurent Modolo authored 6 years ago
  
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  259e4d5b
- bcftools: add singularity files · 9329a13d
  Laurent Modolo authored 6 years ago
  
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  9329a13d
- fastqc: add singularity to nf files · c55f3be5
  Laurent Modolo authored 6 years ago
  
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  c55f3be5
- update link for all modules names to lowercase · 9b037d38
  Laurent Modolo authored 6 years ago
  
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  9b037d38
- rename module to lowercase · 231fd9e6
  Laurent Modolo authored 6 years ago
  
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  231fd9e6
- fastqc: add singularity files · f0c49b7f
  Laurent Modolo authored 6 years ago
  
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  f0c49b7f
Mar 01, 2019
- Bowtie2: add singularity to nf files · cbd23ab6
  Laurent Modolo authored 6 years ago
  
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  cbd23ab6
- Bowtie: add singularity to nf files · 11a52fbc
  Laurent Modolo authored 6 years ago
  
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  11a52fbc
- Bowtie: add singularity files and add signature for singularity build · 3075c9c2
  Laurent Modolo authored 6 years ago
  
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- BWA: add singularity def · 1f430b33
  Laurent Modolo authored 6 years ago
  
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  1f430b33
- BWA: add singularity to nf files · a494361b
  Laurent Modolo authored 6 years ago
  
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  a494361b
- bedtools: update singularity path · edd04712
  Laurent Modolo authored 6 years ago
  
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- UrQt: update singularity path · 1bba0da1
  Laurent Modolo authored 6 years ago
  
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- sambamba: fix singularity path · 3dc1c869
  Laurent Modolo authored 6 years ago
  
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- sambamba: add singularity files · 18e9f912
  Laurent Modolo authored 6 years ago
  
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  18e9f912
- BEDtools: add singularity to nf files · f1a4275c
  Laurent Modolo authored 6 years ago
  
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  f1a4275c
- BEDtools: add singularity files · 5991008e
  Laurent Modolo authored 6 years ago
  
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  5991008e
- UrQt: add singularity tests · 9fb75825
  Laurent Modolo authored 6 years ago
  
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- UrQt: switch cpus config from .nf to .config · c8902c46
  Laurent Modolo authored 6 years ago
  
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  c8902c46
- UrQt: add singularity config and test · 2901dd9f
  Laurent Modolo authored 6 years ago
  
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  2901dd9f
- UrQt: add singularity files · b51f888d
  Laurent Modolo authored 6 years ago
  
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  b51f888d
- add bin folder to the project · 73c00f12
  Laurent Modolo authored 6 years ago
  
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Feb 20, 2019
- cudatapt: add cutadapt v1.15 for docker and nf · 93f2be99
  Laurent Modolo authored 6 years ago
  
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Feb 15, 2019
- Merge branch 'master' of gitlab_lbmc:pipelines/nextflow · 110a92e1
  Laurent Modolo authored 6 years ago
  
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  110a92e1
- TP_experimental_biologists.md : fix for PSMN computers · d854d051
  Laurent Modolo authored 6 years ago
  
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- Merge branch 'master' of gitlab_lbmc:pipelines/nextflow · ea8eaa49
  Laurent Modolo authored 6 years ago
  
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  ea8eaa49
- TP_experimental_biologists.md: add fix for docker · 3a337a8f
  Laurent Modolo authored 6 years ago
  
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- UrQt: Dockerfile add version · 7d4588a7
  Laurent Modolo authored 6 years ago
  
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  7d4588a7
Feb 10, 2019
- MultiQC: fix Dockerfile for debian · 8bc50851
  Laurent Modolo authored 6 years ago
  
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  8bc50851
Feb 07, 2019
- MultiQC: add ps tools to Dockerfile · d651e144
  Laurent Modolo authored 6 years ago
  
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- MultiQC: switch Dockerfile from ubuntu to debian · c70c6503
  Laurent Modolo authored 6 years ago
  
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Feb 05, 2019
- deepTools: add ps to Dockerfile · 1d82bf7c
  Laurent Modolo authored 6 years ago
  
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- deepTools: Dockerfile add v3.1.1 · 6feaf7ac
  Laurent Modolo authored 6 years ago
  
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- ucsc: install app in docker ... · 8e0939bc
  Laurent Modolo authored 6 years ago
  
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- ucsc: fix Dockerfile · af991e09
  Laurent Modolo authored 6 years ago
  
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  af991e09
- deepTools: Dockerfile fix deepTools (ubuntu -> debian) · 5ad5735c
  Laurent Modolo authored 6 years ago
  
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- UCSC: add Dockerfile · 6fb743f5
  Laurent Modolo authored 6 years ago
  
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Dec 21, 2018
- ucsc: add docker · 504d7682
  Laurent Modolo authored 6 years ago
  
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- switch SAMtools to alpine · 2bb534c5
  Laurent Modolo authored 6 years ago
  
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  2bb534c5
Dec 20, 2018
- SAMtools: Dockerfile ubuntu -> alpine · 86ff02d6
  Laurent Modolo authored 6 years ago
  
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  86ff02d6