Skip to content
Snippets Groups Projects
Commit b89b3a75 authored by Laurent Modolo's avatar Laurent Modolo
Browse files

SRAtoolkit install: fix to copy ncbi folder

parent 7fa7349d
No related branches found
No related tags found
No related merge requests found
Hide whitespace changes
Inline Side-by-side
apps/SRAtoolkit/install_2.8.2.sh
+ 1
− 1
View file @ b89b3a75
...@@ -40,5 +40,5 @@ http://ftp-trace.ncbi.nlm.nih.gov/sra/sdk/${SRATOOLKIT_VERSION}/sratoolkit.${SRA ...@@ -40,5 +40,5 @@ http://ftp-trace.ncbi.nlm.nih.gov/sra/sdk/${SRATOOLKIT_VERSION}/sratoolkit.${SRA
curl -k -L http://ftp-trace.ncbi.nlm.nih.gov/sra/sdk/${SRATOOLKIT_VERSION}/sratoolkit.${SRATOOLKIT_VERSION}-ubuntu64.tar.gz -o sratoolkit.${SRATOOLKIT_VERSION}-ubuntu64.tar.gz curl -k -L http://ftp-trace.ncbi.nlm.nih.gov/sra/sdk/${SRATOOLKIT_VERSION}/sratoolkit.${SRATOOLKIT_VERSION}-ubuntu64.tar.gz -o sratoolkit.${SRATOOLKIT_VERSION}-ubuntu64.tar.gz
tar xvf sratoolkit.${SRATOOLKIT_VERSION}-ubuntu64.tar.gz tar xvf sratoolkit.${SRATOOLKIT_VERSION}-ubuntu64.tar.gz
mkdir -p ${SRATOOLKIT_VERSION}/bin mkdir -p ${SRATOOLKIT_VERSION}/bin
cp sratoolkit.${SRATOOLKIT_VERSION}-ubuntu64/bin/* ${SRATOOLKIT_VERSION}/bin cp -R sratoolkit.${SRATOOLKIT_VERSION}-ubuntu64/bin/* ${SRATOOLKIT_VERSION}/bin
rm -Rf sratoolkit.${SRATOOLKIT_VERSION}-ubuntu64.tar.gz sratoolkit.${SRATOOLKIT_VERSION}-ubuntu64 rm -Rf sratoolkit.${SRATOOLKIT_VERSION}-ubuntu64.tar.gz sratoolkit.${SRATOOLKIT_VERSION}-ubuntu64
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Please register or to comment